RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 DMBX1Q8NFW5 382 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 TERB2Q8NHR7 220 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 TMEM167AQ8TBQ9 72 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 SRSF12Q8WXF0 261 aaKnown RBP8.53□□□□□ -1.04
CHMP3-205ENST00000409810 PRRT1Q99946 306 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 SLA2Q9H6Q3 261 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 ZNF430Q9H8G1 570 aaPredicted RBP8.53□□□□□ -1.04
CHMP3-205ENST00000409810 HRASLSQ9HDD0 168 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 SLC2A9Q9NRM0 540 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 FAM212BQ9NTI7 297 aaPredicted RBP8.53□□□□□ -1.04
CHMP3-205ENST00000409810 SCP2D1Q9UJQ7 156 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 VWFP04275 2813 aa8.53□□□□□ -1.04
CHMP3-205ENST00000409810 NOTCH3Q9UM47 2321 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 ANKRD20A5PA0PJZ0 165 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 S1PR2O95136 353 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 CD33P20138 364 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 RAB9AP51151 201 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 BRWD1-AS2P59051 145 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 RND3P61587 244 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 RPL8P62917 257 aaKnown RBP8.52□□□□□ -1.05
CHMP3-205ENST00000409810 POU2AF1Q16633 256 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 OR4A47Q6IF82 309 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 LCNL1Q6ZST4 164 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 C8orf86Q6ZUL3 223 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 VKORC1L1Q8N0U8 176 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 OR4C16Q8NGL9 310 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 MYOZ3Q8TDC0 251 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 DEDD2Q8WXF8 326 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 UBE2E2Q96LR5 201 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 SPIN2AQ99865 258 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 SPIN2BQ9BPZ2 258 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 THAP7Q9BT49 309 aaPredicted RBP8.52□□□□□ -1.05
CHMP3-205ENST00000409810 ZNF355PQ9NSJ1 428 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 C14orf166Q9Y224 244 aaKnown RBP8.52□□□□□ -1.05
CHMP3-205ENST00000409810 VSIG4Q9Y279 399 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 V9GYH0 126 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
CHMP3-205ENST00000409810 MARCH11A6NNE9 402 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 FGF2P09038 288 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 MYCNOSP40205 109 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 ETV6P41212 452 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 RPL27AP46776 148 aaKnown RBP8.51□□□□□ -1.05
CHMP3-205ENST00000409810 PIGPP57054 158 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 TPPP2P59282 170 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 SSBP2P81877 361 aaPredicted RBP8.51□□□□□ -1.05
CHMP3-205ENST00000409810 SURF2Q15527 256 aaPredicted RBP8.51□□□□□ -1.05
CHMP3-205ENST00000409810 CCDC190Q86UF4 302 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 SLC25A42Q86VD7 318 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 Q8N402 240 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 ZNF491Q8N8L2 437 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 OR6Q1Q8NGQ2 317 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 TMEM140Q9NV12 185 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 MCUBQ9NWR8 336 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 SLC2A8Q9NY64 477 aa8.51□□□□□ -1.05
CHMP3-205ENST00000409810 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 MSGN1A6NI15 193 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 CCL24O00175 119 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 SOX15O60248 233 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 B3GALNT1O75752 331 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 ATG12O94817 140 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 SERPINE2P07093 398 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 CTSDP07339 412 aaPredicted RBP8.5□□□□□ -1.05
CHMP3-205ENST00000409810 ZNF735P0CB33 412 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 RPA2P15927 270 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 HLA-GP17693 338 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 LPAR6P43657 344 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 ZNF79Q15937 498 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 MRGPRG-AS1Q2M3A8 158 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
CHMP3-205ENST00000409810 FAAP20Q6NZ36 180 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 C18orf65Q6ZTR6 163 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 CADM3Q8N126 398 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 TOMM5Q8N4H5 51 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 OR13C8Q8NGS7 320 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 TSC22D3Q99576 134 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 GPR61Q9BZJ8 451 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 COMMD5Q9GZQ3 224 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 KLK15Q9H2R5 256 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 NBEAL1Q6ZS30 2694 aa8.5□□□□□ -1.05
CHMP3-205ENST00000409810 C13orf42A0A1B0GVH6 325 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 H0Y980 276 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 UPK2O00526 184 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 SNAPC5O75971 98 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 BRI3O95415 125 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 DUS4LO95620 317 aaKnown RBP8.49□□□□□ -1.05
CHMP3-205ENST00000409810 KRASP01116 189 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 TRGV3P03979 118 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 LGALS1P09382 135 aaKnown RBP8.49□□□□□ -1.05
CHMP3-205ENST00000409810 OR9G9P0C7N8 305 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 INPP1P49441 399 aa8.49□□□□□ -1.05
CHMP3-205ENST00000409810 RUNX1Q01196 453 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms