RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 CFHR4Q92496 578 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 TBL2Q9Y4P3 447 aaKnown RBP12.59□□□□□ -0.39
SHANK2-204ENST00000409530 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
SHANK2-204ENST00000409530 A0A1B0GU03 582 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 TSC22D2O75157 780 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 RRASP10301 218 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 GATA3P23771 443 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 MC5RP33032 325 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 SRSF4Q08170 494 aaKnown RBP12.58□□□□□ -0.4
SHANK2-204ENST00000409530 FGL1Q08830 312 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 PLGLAQ15195 96 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 MMDQ15546 238 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 OSR1Q8TAX0 266 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-204ENST00000409530 FAM212BQ9NTI7 297 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-204ENST00000409530 FAM96BQ9Y3D0 163 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 ST8SIA3O43173 380 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 IFNA17P01571 189 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 P0C879 139 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 GNB1P62873 340 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 MIDNQ504T8 468 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 TMEM177Q53S58 311 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 AJUBAQ96IF1 538 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 HYLS1Q96M11 299 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 NUP50Q9UKX7 468 aa12.58□□□□□ -0.4
SHANK2-204ENST00000409530 PJVKQ0ZLH3 352 aa12.57□□□□□ -0.4
SHANK2-204ENST00000409530 IL15RAQ13261 267 aa12.57□□□□□ -0.4
SHANK2-204ENST00000409530 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
SHANK2-204ENST00000409530 ZC4H2Q9NQZ6 224 aa12.57□□□□□ -0.4
SHANK2-204ENST00000409530 POMT1Q9Y6A1 747 aa12.57□□□□□ -0.4
SHANK2-204ENST00000409530 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 DEDDO75618 318 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 SNAPC5O75971 98 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 PET100P0DJ07 73 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 APELAP0DMC3 54 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 F2RL1P55085 397 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 C10orf55Q5SWW7 151 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 BCL6BQ8N143 479 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-204ENST00000409530 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 MALSU1Q96EH3 234 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 TNFRSF19Q9NS68 423 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-204ENST00000409530 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
SHANK2-204ENST00000409530 PLXNB1O43157 2135 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 MSGN1A6NI15 193 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
SHANK2-204ENST00000409530 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 L7N2F9 121 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 KBTBD11O94819 623 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 RLN2P04090 185 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 CAV2P51636 162 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 VAMP2P63027 116 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 RELBQ01201 579 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 TMEM219Q86XT9 240 aa12.56□□□□□ -0.4
SHANK2-204ENST00000409530 CHST1O43916 411 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 PITX3O75364 302 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 TMEM11P17152 192 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 CXCL2P19875 107 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 VMA21Q3ZAQ7 101 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 C9orf62Q8N4C0 152 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-204ENST00000409530 SMR3AQ99954 134 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 RBKSQ9H477 322 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 TNCP24821 2201 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 MOSP00540 346 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
SHANK2-204ENST00000409530 LY6EQ16553 131 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 MFFQ9GZY8 342 aa12.55□□□□□ -0.4
SHANK2-204ENST00000409530 SETXQ7Z333 2677 aaKnown RBP12.54□□□□□ -0.4
SHANK2-204ENST00000409530 J3QLI3 93 aa12.54□□□□□ -0.4
SHANK2-204ENST00000409530 SYNGR2O43760 224 aa12.54□□□□□ -0.4
SHANK2-204ENST00000409530 HOXA1P49639 335 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-204ENST00000409530 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-204ENST00000409530 PSG5Q15238 335 aa12.54□□□□□ -0.4
SHANK2-204ENST00000409530 LAMTOR1Q6IAA8 161 aa12.54□□□□□ -0.4
SHANK2-204ENST00000409530 ZNF430Q9H8G1 570 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-204ENST00000409530 OR51B2Q9Y5P1 312 aa12.54□□□□□ -0.4
SHANK2-204ENST00000409530 TMEM50AO95807 157 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 CD1BP29016 333 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 UBE2KP61086 200 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 TNXAQ16473 311 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 LGALSLQ3ZCW2 172 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-204ENST00000409530 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 INO80EQ8NBZ0 244 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-204ENST00000409530 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 MXRA5Q9NR99 2828 aa12.53□□□□□ -0.4
SHANK2-204ENST00000409530 FAM24AA6NFZ4 105 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms