RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 GATAD1Q8WUU5 269 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 SPSB4Q96A44 273 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 RBFOX2O43251 390 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 PAGE4O60829 102 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 EFNA4P52798 201 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 B3GALT5-AS1P59052 145 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 WDR82Q6UXN9 313 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 FAM216BQ8N7L0 139 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 C5orf17Q8NAS9 161 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 RND2P52198 227 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 C3orf36Q3SXR2 165 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 F5H697 171 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 HSPB1P04792 205 aaKnown RBP14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 MMP7P09237 267 aaPredicted RBP14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 PSG9Q00887 426 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 FOXL2NBQ6ZUU3 175 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 DTX1Q86Y01 620 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 DNAJC4Q9NNZ3 241 aa14.15□□□□□ -0.14
PCDHA13-202ENST00000409494 KIAA1324LA8MWY0 1029 aaPredicted RBP14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 CCKARP32238 428 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 TMEM78Q5T7P6 136 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 SAMD13Q5VXD3 122 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 IGF2-ASQ6U949 168 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 OR10J6PQ8NGY7 276 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 PRR32B1ATL7 298 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 C7orf69Q9H7B7 122 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 TRBV6-7A0A0A0MS04 114 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 ZNHIT1O43257 154 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 DANCRP0C864 163 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 ZNF880Q6PDB4 577 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 LINC00518Q8N0U6 118 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 INTS1Q8N201 2190 aaKnown RBP14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 OR4C12Q96R67 309 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 SPINK4O60575 86 aa14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 PSMG3Q9BT73 122 aaPredicted RBP14.14□□□□□ -0.15
PCDHA13-202ENST00000409494 A1L4Q6 167 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 RNF222A6NCQ9 220 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 CENPVQ7Z7K6 275 aaPredicted RBP14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 A0A087X0M5 115 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 TRAV14DV4A0A0A6YYC5 116 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 A0A1B0GX30 115 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 OOSP1A8MZH6 123 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 SRRM5B3KS81 715 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 MOSP00540 346 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 OR13A1Q8NGR1 328 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 TMEM56-RWDD3S4R434 201 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 C8orf88P0DMB2 117 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 HCP5Q6MZN7 132 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 OR51G1Q8NGK1 321 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 CACNG8Q8WXS5 425 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 SRSF10O75494 262 aaKnown RBP14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 HIST3H3Q16695 136 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 RSG1Q9BU20 258 aa14.13□□□□□ -0.15
PCDHA13-202ENST00000409494 ANAPC1Q9H1A4 1944 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 A0A087WV48 116 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 MSGN1A6NI15 193 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 CD81P60033 236 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 FOXF2Q12947 444 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 ARL2-SNX15V9GYD0 113 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 RTTNQ86VV8 2226 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 TMEM183BQ1AE95 376 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 MESP1Q9BRJ9 268 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 GOLT1BQ9Y3E0 138 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 TGFAP01135 160 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 CRISP2P16562 243 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 NHLH1Q02575 133 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 EIF4E3Q8N5X7 224 aaKnown RBP14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 ZNF383Q8NA42 475 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 OR10S1Q8NGN2 331 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 PRSS3P2Q8NHM4 247 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 GFI1Q99684 422 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 DCTN5Q9BTE1 182 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 NAGKQ9UJ70 344 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 FUT9Q9Y231 359 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 IGHV1-46P01743 117 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 NPPCP23582 126 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 TMEM133Q9H2Q1 129 aa14.12□□□□□ -0.15
PCDHA13-202ENST00000409494 SNCGO76070 127 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 TSPOP30536 169 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 GAMTQ14353 236 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 LOC105371267A0A1B0GV96 52 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 MPZP25189 248 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 ZNF497Q6ZNH5 498 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 CARHSP1Q9Y2V2 147 aaKnown RBP14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 H0YL77 283 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 RPL29P47914 159 aaKnown RBP14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 LCN2P80188 198 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 LYZL4Q96KX0 146 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 C16orf92Q96LL3 132 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 NPFFR1Q9GZQ6 430 aa14.11□□□□□ -0.15
PCDHA13-202ENST00000409494 A8MWL6 223 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 RNASEH2CQ8TDP1 164 aaKnown RBP14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 ZG16O60844 167 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 HNRNPA3P51991 378 aaKnown RBP14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 RPS20P60866 119 aaKnown RBP14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 IGKV1-9A0A0C4DH69 117 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 KLK2P20151 261 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 KIF26BQ2KJY2 2108 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 ISLRO14498 428 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms