RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CD1BP29016 333 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 MAGEA5P43359 124 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 CATR1Q13166 79 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 MDS2Q8NDY4 140 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 OR2D2Q9H210 308 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
LIMS2-205ENST00000409455 TRBV9A0A0B4J1U6 114 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 SLC17A3O00476 420 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 S1PR2O95136 353 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 CTRLP40313 264 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
LIMS2-205ENST00000409455 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 SPINK9Q5DT21 86 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 Q6P435 159 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 Q6ZN92 141 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 TMEM204Q9BSN7 226 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
LIMS2-205ENST00000409455 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 RHBDL1O75783 438 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 CXorf1O96002 111 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 CCL11P51671 97 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 LGALS4P56470 323 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
LIMS2-205ENST00000409455 RPEL1Q2QD12 228 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 KRTCAP3Q53RY4 240 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 Q8N7P7 452 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 PKIBQ9C010 78 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 GAL3ST2Q9H3Q3 398 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 LAMTOR2Q9Y2Q5 125 aa12.89□□□□□ -0.35
LIMS2-205ENST00000409455 MRPL33O75394 65 aaKnown RBP12.88□□□□□ -0.35
LIMS2-205ENST00000409455 MMP23AO75900 390 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 NGFP01138 241 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
LIMS2-205ENST00000409455 COTL1Q14019 142 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-205ENST00000409455 TMEM251Q8N6I4 163 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 STPG4Q8N801 248 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 C22orf15Q8WYQ4 148 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 MPDU1O75352 247 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 CLDN14O95500 239 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 OR2H2O95918 312 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 AMTP48728 403 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 ARG2P78540 354 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 HTD2P86397 168 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 PLGLB1Q02325 96 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 HLA-DRB5Q30154 266 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 Q8N976 141 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-205ENST00000409455 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 PPIAL4AQ9Y536 164 aa12.88□□□□□ -0.35
LIMS2-205ENST00000409455 LAMA5O15230 3695 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 RAB29O14966 203 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-205ENST00000409455 ZNF253O75346 499 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 NDUFB8O95169 186 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 MEOX1P50221 254 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 RPL30P62888 115 aaKnown RBP12.87□□□□□ -0.35
LIMS2-205ENST00000409455 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 SRYQ05066 204 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 FDCSPQ8NFU4 85 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 MBNL3Q9NUK0 354 aaKnown RBP12.87□□□□□ -0.35
LIMS2-205ENST00000409455 URB1O60287 2271 aaKnown RBP12.87□□□□□ -0.35
LIMS2-205ENST00000409455 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 J3QT63 122 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 HYPMO75409 117 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 IGLC2P0DOY2 106 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 IGLC3P0DOY3 106 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 CD46P15529 392 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 MMD2Q8IY49 270 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
LIMS2-205ENST00000409455 C15orf62A8K5M9 175 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 K7EN84 100 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 MT-ND6P03923 174 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 OPRK1P41145 380 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 KLF3P57682 345 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-205ENST00000409455 RPL31P62899 125 aaKnown RBP12.86□□□□□ -0.35
LIMS2-205ENST00000409455 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-205ENST00000409455 OR10J3Q5JRS4 329 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 NAT8BQ9UHF3 227 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 SH2D1BO14796 132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms