RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HRASP01112 189 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OPN1MWP04001 364 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 HOXB5P09067 269 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OPN1MW2P0DN77 364 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OPN1MW3P0DN78 364 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 ANXA3P12429 323 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 NQO2P16083 231 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OR2B8PP59922 312 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 ERVK-16P61578 105 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 NPBQ8NG41 125 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 OR11H7Q8NGC8 314 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 SEC22AQ96IW7 307 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 RASL11BQ9BPW5 248 aa11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-204ENST00000409323 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 CCSO14618 274 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 CREBL2O60519 120 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 ADAP1O75689 374 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 NXPH3O95157 252 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 CA2P00918 260 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 CRYGBP07316 175 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 HLA-GP17693 338 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 LGALS7P47929 136 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 RELBQ01201 579 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 FCN2Q15485 313 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 C10orf55Q5SWW7 151 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 FAM219AQ8IW50 185 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 RBPMSQ93062 196 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 COMMD9Q9P000 198 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 SETD2Q9BYW2 2564 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-204ENST00000409323 CLDN34H7C241 214 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 OR2A4O95047 310 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 APELAP0DMC3 54 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 UBE2KP61086 200 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 H2BFWTQ7Z2G1 175 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 PUSL1Q8N0Z8 303 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 LGI3Q8N145 548 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 TCTEX1D1Q8N7M0 179 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM56Q96MV1 263 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 RNF5Q99942 180 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 FAM103A1Q9BTL3 118 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 ZNF430Q9H8G1 570 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM56-RWDD3S4R434 201 aa11.18□□□□□ -0.62
CHRNA1-204ENST00000409323 DBX1A6NMT0 343 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 MPTX1A8MV57 137 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 TRIM77I1YAP6 450 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 KBTBD11O94819 623 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 DUS4LO95620 317 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 CRYBA1P05813 215 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 CXCL3P19876 107 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 NDPQ00604 133 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 TNXAQ16473 311 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 Q6ZRM9 215 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 PPP1R27Q86WC6 154 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 ABHD5Q8WTS1 349 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 MITD1Q8WV92 249 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 GPR146Q96CH1 333 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 FYTTD1Q96QD9 318 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 NF1P21359 2839 aa11.17□□□□□ -0.62
CHRNA1-204ENST00000409323 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 A0A0B4J2A0 478 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 FGF16O43320 207 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 SPDEFO95238 335 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 SPINK9Q5DT21 86 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 Q6ZSV7 163 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 OR8H1Q8NGG4 311 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 ASB13Q8WXK3 278 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 FAM212BQ9NTI7 297 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 SHPKQ9UHJ6 478 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 E7EUB6 86 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 UPK2O00526 184 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 CNIH1O95406 144 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 CX3CL1P78423 397 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms