RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 MPZP25189 248 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 PCSK4Q6UW60 755 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 AICDAQ9GZX7 198 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 RRHO14718 337 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 SPEM2Q0P670 501 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
RNF43-201ENST00000407977 OR5P3Q8WZ94 311 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 LINC00470Q9BZP3 86 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 KNTC1P50748 2209 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 FOCADQ5VW36 1801 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 EGR4Q05215 589 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 DDB2Q92466 427 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 GEMIN7Q9H840 131 aaKnown RBP11.04□□□□□ -0.64
RNF43-201ENST00000407977 BTCP35070 178 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 SLC25A53Q5H9E4 307 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 RTN4RQ9BZR6 473 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 MARF1Q9Y4F3 1742 aaKnown RBP11.04□□□□□ -0.64
RNF43-201ENST00000407977 NBEAP1P0C6P0 100 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
RNF43-201ENST00000407977 PEX7O00628 323 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 IFI27L2Q9H2X8 130 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 TRAV8-6A0A0B4J262 113 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 EGR1P18146 543 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 hCG_38984A0A1B0GV85 526 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 C4orf51C9J302 202 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 OR4X2Q8NGF9 303 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 KLF14Q8TD94 323 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 SIPA1L3O60292 1781 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 COL18A1P39060 1754 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 ZNF525Q8N782 197 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
RNF43-201ENST00000407977 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 NRN1Q9NPD7 142 aa11.03□□□□□ -0.64
RNF43-201ENST00000407977 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.64
RNF43-201ENST00000407977 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.64
RNF43-201ENST00000407977 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.64
RNF43-201ENST00000407977 OR5A1Q8NGJ0 315 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 CCDC88CQ9P219 2028 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 RAMP1O60894 148 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 GPX1P07203 203 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 FAM106AQ4KMX7 169 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 ARL6IP6Q8N6S5 226 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 RNF126Q9BV68 326 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 NPIPB11E5RHQ5 1161 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 GREM1O60565 184 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 IGFBP3P17936 291 aaPredicted RBP11.02□□□□□ -0.65
RNF43-201ENST00000407977 KLRB1Q12918 225 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 ICAM4Q14773 271 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 ZNF124Q15973 351 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 SCARF2Q96GP6 870 aaPredicted RBP11.02□□□□□ -0.65
RNF43-201ENST00000407977 IMMP2LQ96T52 175 aa11.02□□□□□ -0.65
RNF43-201ENST00000407977 H7C1H1 209 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 SLC17A3O00476 420 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 THY1P04216 161 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 GPR183P32249 361 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 SEC16AO15027 2179 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 MIA3Q5JRA6 1907 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 C1QL4Q86Z23 238 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 SP7Q8TDD2 431 aaPredicted RBP11.01□□□□□ -0.65
RNF43-201ENST00000407977 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 TPRP12270 2363 aaKnown RBP11.01□□□□□ -0.65
RNF43-201ENST00000407977 SCN3AQ9NY46 2000 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 TRAV9-2A0A087WT02 112 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 SERF1AO75920 110 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 CGAP01215 116 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 NPPCP23582 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 CCL20P78556 96 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 PAPPAQ13219 1627 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 LAMB2P55268 1798 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 SCO2A0A1W2PP80 73 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BKO60814 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BJP06899 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BOP23527 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BBP33778 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BDP58876 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BCP62807 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST2H2BEQ16778 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BHQ93079 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BNQ99877 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 HIST1H2BMQ99879 126 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
RNF43-201ENST00000407977 ADRA2AP08913 450 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms