RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 OR5AP2Q8NGF4 316 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 VSTM2AQ8TAG5 236 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 SLC5A7Q9GZV3 580 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 A0A087WXM4 84 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 BMPR1BO00238 502 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 SULT1C2O00338 296 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 OR2J3O76001 311 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 MYOD1P15172 320 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 MSMO1Q15800 293 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 UBE2NLQ5JXB2 153 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 CROCCP3Q8IVE0 287 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 Q8N1Y9 231 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 SAMD12Q8N8I0 201 aa14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 S100A16Q96FQ6 103 aaKnown RBP14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 FYTTD1Q96QD9 318 aaKnown RBP14.7□□□□□ -0.06
SMARCB1-204ENST00000407422 CSN3P07498 182 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 CBX5P45973 191 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 RPL27AP46776 148 aaKnown RBP14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 ZNF818PQ6ZRF7 136 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 TMEM17Q86X19 198 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 SPAG16Q8N0X2 631 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 NECAP1Q8NC96 275 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 GIMAP1Q8WWP7 306 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 FAM210AQ96ND0 272 aa14.69□□□□□ -0.06
SMARCB1-204ENST00000407422 TNFAIP8O95379 198 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 HRASP01112 189 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 KIR2DS2P43631 304 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 C15orf32Q32M92 178 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 OR4A47Q6IF82 309 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 ZBTB34Q8NCN2 500 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 VCX3AQ9NNX9 186 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 IFT46Q9NQC8 304 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 ZNF257Q9Y2Q1 563 aa14.68□□□□□ -0.06
SMARCB1-204ENST00000407422 ZNF735P0CB33 412 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 AREGP15514 252 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 MAS1LP35410 378 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 RFX2P48378 723 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 TAS2R20P59543 309 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 RPL8P62917 257 aaKnown RBP14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 TATDN3Q17R31 274 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 SLC25A42Q86VD7 318 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 SLC2A9Q9NRM0 540 aa14.67□□□□□ -0.06
SMARCB1-204ENST00000407422 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 NPIPB5A8MRT5 1133 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 IGHV4-30-4P0DP06 118 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 TMEM69Q5SWH9 247 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 OR51H1Q8NH63 302 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 EHFQ9NZC4 300 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 TRAV3A0A0B4J244 114 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 DPPA5A6NC42 116 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 IZUMO1RA6ND01 250 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 CGB1A6NKQ9 187 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 PPP5D1E7EU14 171 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 RBFOX2O43251 390 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■■■■ 33.6
SMARCB1-204ENST00000407422 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 HLA-GP17693 338 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 SLC25A46Q96AG3 418 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 RCHY1Q96PM5 261 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 FANCD2OSQ96PS1 177 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 HRASLSQ9HDD0 168 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 BET1LQ9NYM9 111 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 SIGLEC8Q9NYZ4 499 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 FBXL7Q9UJT9 491 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 DMRT1Q9Y5R6 373 aa14.66□□□□□ -0.06
SMARCB1-204ENST00000407422 H0Y980 276 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 IGHV3-23P01764 117 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 PMP2P02689 132 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 REG1AP05451 166 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 GNRHRP30968 328 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 NCS1P62166 190 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 CATR1Q13166 79 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 ADAMTSL5Q6ZMM2 481 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 S4R3C0 116 aa14.65□□□□□ -0.06
SMARCB1-204ENST00000407422 NDUFB8O95169 186 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 EIF4EP06730 217 aaKnown RBP14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 CRYGCP07315 174 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 PSMB6P28072 239 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 HERV-K104P61576 105 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 DHRS11Q6UWP2 260 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 THAP7Q9BT49 309 aaPredicted RBP14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 FUNDC2Q9BWH2 189 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 PEMTQ9UBM1 199 aa14.64□□□□□ -0.07
SMARCB1-204ENST00000407422 S1PR2O95136 353 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 HPRT1P00492 218 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 CTRB1P17538 263 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 MECP2P51608 486 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 TAS2R31P59538 309 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 VBP1P61758 197 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 AADACL3Q5VUY0 350 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 CTRB2Q6GPI1 263 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 OR4A5Q8NH83 315 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 AIFM2Q9BRQ8 373 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 ZNF2Q9BSG1 426 aaPredicted RBP14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 C19orf73Q9NVV2 129 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 UPK2O00526 184 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 RPA2P15927 270 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 NQO2P16083 231 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 NAT1P18440 290 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 EDN2P20800 178 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms