RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PRAMEF5Q5TYX0 476 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 PRAMEF6Q5VXH4 476 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 ZNF497Q6ZNH5 498 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 TMEM144Q7Z5S9 345 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 GCNT2Q8N0V5 402 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 KCNE4Q8WWG9 221 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 SSBP3Q9BWW4 388 aaPredicted RBP7.98□□□□□ -1.13
SMC1B-202ENST00000404354 PLXNB1O43157 2135 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 TNFSF13O75888 250 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 VENTXO95231 258 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 CGAP01215 116 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 LYSMD4Q5XG99 296 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 MOB3BQ86TA1 216 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 R3HDM4Q96D70 268 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 PHF7Q9BWX1 381 aaPredicted RBP7.98□□□□□ -1.13
SMC1B-202ENST00000404354 ZNF576Q9H609 170 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 DMXL2Q8TDJ6 3036 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 ZNF253O75346 499 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 MRPS11P82912 194 aaKnown RBP7.98□□□□□ -1.13
SMC1B-202ENST00000404354 UNQ5815/PRO19632Q6UWF5 114 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 MMD2Q8IY49 270 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 ST6GALNAC6Q969X2 333 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 STARD4Q96DR4 205 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 SGK494Q96LW2 274 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 DEFB127Q9H1M4 99 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 RNF24Q9Y225 148 aa7.98□□□□□ -1.13
SMC1B-202ENST00000404354 LOC102723996A0A087X1L8 192 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 LOC102724200A0A096LPH7 203 aaPredicted RBP7.97□□□□□ -1.13
SMC1B-202ENST00000404354 AHRRA9YTQ3 701 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 J3QT63 122 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 HAND1O96004 215 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 CRYBB3P26998 211 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 PLGLB1Q02325 96 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 UTF1Q5T230 341 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 FAM216AQ8WUB2 273 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 SH2D2AQ9NP31 389 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 PDE6DO43924 150 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 LYZL6O75951 148 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
SMC1B-202ENST00000404354 CATR1Q13166 79 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 RAB30Q15771 203 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 RPL39P5Q59GN2 51 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 ETFRF1Q6IPR1 90 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 PQLC2Q6ZP29 291 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 SAXO1Q8IYX7 474 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 ZNF645Q8N7E2 425 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 LOXL2Q9Y4K0 774 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 TIMM9Q9Y5J7 89 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 PKDREJQ9NTG1 2253 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 TOX3O15405 576 aaPredicted RBP7.97□□□□□ -1.13
SMC1B-202ENST00000404354 FABP6P51161 128 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 PTTG1IPP53801 180 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 LHFPL4Q7Z7J7 247 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 OR13A1Q8NGR1 328 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 SAP25Q8TEE9 199 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 STRADBQ9C0K7 418 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 NRN1Q9NPD7 142 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 GNG12Q9UBI6 72 aa7.97□□□□□ -1.13
SMC1B-202ENST00000404354 MRPS18CQ9Y3D5 142 aaKnown RBP7.97□□□□□ -1.13
SMC1B-202ENST00000404354 CEP192Q8TEP8 1941 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 AGFG2O95081 481 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 IGHV3-48P01763 117 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 SRIP30626 198 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 FOXL1Q12952 345 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 Q8N7P7 452 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 OR2M7Q8NG81 312 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 OR4A16Q8NH70 328 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 RNASE8Q8TDE3 154 aaKnown RBP7.96□□□□□ -1.13
SMC1B-202ENST00000404354 MGST2Q99735 147 aa7.96□□□□□ -1.13
SMC1B-202ENST00000404354 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.13
SMC1B-202ENST00000404354 PCNX2A6NKB5 2137 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 OR5B21A6NL26 309 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 RNF212BA8MTL3 300 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 M0R1X1 148 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 OR5G3P0C626 314 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 CXCL12P48061 93 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 GFRA1P56159 465 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 ATP6V1FQ16864 119 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 PPP1R32Q7Z5V6 425 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 LINC00479Q96M42 142 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 PLCE1Q9P212 2302 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 YPEL1O60688 119 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMC1B-202ENST00000404354 MLANAQ16655 118 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 SLC25A40Q8TBP6 338 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 YPEL2Q96QA6 119 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 RTL8AQ9BWD3 113 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 MPC1Q9Y5U8 109 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 DYSFO75923 2080 aa7.96□□□□□ -1.14
SMC1B-202ENST00000404354 YLPM1P49750 1951 aaKnown RBP7.95□□□□□ -1.14
SMC1B-202ENST00000404354 CD24P25063 80 aa7.95□□□□□ -1.14
SMC1B-202ENST00000404354 S100A7P31151 101 aa7.95□□□□□ -1.14
SMC1B-202ENST00000404354 GPR6P46095 362 aaPredicted RBP7.95□□□□□ -1.14
SMC1B-202ENST00000404354 COMPP49747 757 aaPredicted RBP7.95□□□□□ -1.14
SMC1B-202ENST00000404354 HNRNPA3P51991 378 aaKnown RBP7.95□□□□□ -1.14
SMC1B-202ENST00000404354 PSG5Q15238 335 aa7.95□□□□□ -1.14
SMC1B-202ENST00000404354 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
SMC1B-202ENST00000404354 MIR17HGQ75NE6 70 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms