RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	IGLV5-52	A0A0A0MRZ9	124 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461		A0A1W2PP11	408 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IRGM	A1A4Y4	181 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OR11H12	B2RN74	326 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ITGB1BP1	O14713	200 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	BRI3	O95415	125 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CSN3	P07498	182 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CT45A6	P0DMU7	189 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CT45A5	P0DMU8	189 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CT45A7	P0DMV0	189 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ZBTB25	P24278	435 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GTF2A1	P52655	376 aa	Predicted RBP	5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	PSG5	Q15238	335 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	HMGN3	Q15651	99 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461		Q499Y3	187 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	YIF1B	Q5BJH7	314 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IL34	Q6ZMJ4	242 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	PDPN	Q86YL7	162 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CDH26	Q8IXH8	852 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DEFB125	Q8N687	156 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TMEM116	Q8NCL8	245 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SMIM19	Q96E16	107 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	PHB2	Q99623	299 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SULT4A1	Q9BR01	284 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	BANF2	Q9H503	90 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	AMBN	Q9NP70	447 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	COA4	Q9NYJ1	87 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GHRL	Q9UBU3	117 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ZNF221	Q9UK13	617 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MGAT4A	Q9UM21	535 aa		5.07	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CSMD3	Q7Z407	3707 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IGKV2D-30	A0A075B6S6	120 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	FAM223B	A6NKX1	122 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CREBL2	O60519	120 aa	Predicted RBP	5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CIB2	O75838	187 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE7	O76087	117 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	UBB	P0CG47	229 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE12F	P0CL80	117 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE12G	P0CL81	117 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE12I	P0CL82	117 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IGFBP3	P17936	291 aa	Predicted RBP	5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DCK	P27707	260 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE1	Q13065	139 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GAGE4	Q13068	117 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ANKRD55	Q3KP44	614 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GLT8D1	Q68CQ7	371 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ZNF343	Q6P1L6	599 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	FAM223A	Q8IWN6	122 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OR52I1	Q8NGK6	324 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	FAM46B	Q96A09	425 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	UQCC2	Q9BRT2	126 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GGTLC1	Q9BX51	225 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	RIMS4	Q9H426	269 aa	Predicted RBP	5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	BABAM2	Q9NXR7	383 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TECR	Q9NZ01	308 aa	Known RBP	5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SORL1	Q92673	2214 aa		5.06	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TRAV8-7	A0A075B6U6	113 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TRBV5-5	A0A0J9YX44	114 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	hDV102S1	A0JD36	115 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IZUMO1R	A6ND01	250 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	EI24	O14681	340 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	IGKV1-16	P04430	117 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CD7	P09564	240 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	LIMS3	P0CW19	117 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	LIMS4	P0CW20	117 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CEACAM6	P40199	344 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TAS2R43	P59537	309 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ATP5G2	Q06055	141 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	EXOSC2	Q13868	293 aa	Known RBP	5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	RTL8B	Q17RB0	113 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	RHOXF1	Q8NHV9	184 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TMED6	Q8WW62	240 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ORAI1	Q96D31	301 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ABHD14B	Q96IU4	210 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	HARBI1	Q96MB7	349 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	CMTM3	Q96MX0	182 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SLC29A1	Q99808	456 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	SLC35D1	Q9NTN3	355 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	PLEKHJ1	Q9NW61	149 aa		5.05	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DSCAML1	Q8TD84	2053 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461		A0A1W2PPK0	400 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461		M0R1X1	148 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OGG1	O15527	345 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TRBV12-3	P01733	135 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OR9G9	P0C7N8	305 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	FOLR2	P14207	255 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	ZNF182	P17025	639 aa	Predicted RBP	5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	GABRB1	P18505	474 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	APOC4	P55056	127 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	MRPS15	P82914	257 aa	Known RBP	5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	RHOG	P84095	191 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DEFA5	Q01523	94 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	DEFB114	Q30KQ6	69 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	VMA21	Q3ZAQ7	101 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	OR2G6	Q5TZ20	316 aa		5.04	□□□□□ -1.6
CEACAM1-208	ENST00000403461	TTC23	Q5W5X9	447 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms