RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GMPPAQ96IJ6 420 aaPredicted RBP16.45■□□□□ 0.22
CCDC47-202ENST00000403162 DERL1Q9BUN8 251 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 CXXC4Q9H2H0 198 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 CHODLQ9H9P2 273 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 CACNA1GO43497 2377 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 A0A0U1RQK1 487 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 ZNF320A2RRD8 509 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 SNRPCP09234 159 aaKnown RBP16.45■□□□□ 0.22
CCDC47-202ENST00000403162 OR9G9P0C7N8 305 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 EGR1P18146 543 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 OPRK1P41145 380 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 UBE2G2P60604 165 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 CXorf67Q86X51 503 aaPredicted RBP16.45■□□□□ 0.22
CCDC47-202ENST00000403162 OR13A1Q8NGR1 328 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 PSG11Q9UQ72 335 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 EDDM3BP56851 147 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 LINC00205P59089 165 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 RPP30P78346 268 aaKnown RBP16.44■□□□□ 0.22
CCDC47-202ENST00000403162 HTD2P86397 168 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 FOXF2Q12947 444 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 SFRP2Q96HF1 295 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 ADH4P08319 380 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 OR4A8P0C604 315 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 TRAT1Q6PIZ9 186 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 WDR82Q6UXN9 313 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 ZNF114Q8NC26 417 aa16.44■□□□□ 0.22
CCDC47-202ENST00000403162 IGHV3-43A0A0B4J1X8 118 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 IGHG3P01860 377 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 IGHV3-43DP0DP04 118 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 SPCS3P61009 180 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 USF2Q15853 346 aaPredicted RBP16.43■□□□□ 0.22
CCDC47-202ENST00000403162 ELOVL5Q9NYP7 299 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 C15orf65H3BRN8 121 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 SPINT2O43291 252 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 SELLP14151 372 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 DUTP33316 252 aaKnown RBP16.43■□□□□ 0.22
CCDC47-202ENST00000403162 HOXA4Q00056 320 aaPredicted RBP16.43■□□□□ 0.22
CCDC47-202ENST00000403162 TREML4Q6UXN2 200 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 OR52E5Q8NH55 327 aa16.43■□□□□ 0.22
CCDC47-202ENST00000403162 AURKAIP1Q9NWT8 199 aaPredicted RBP16.43■□□□□ 0.22
CCDC47-202ENST00000403162 ATMQ13315 3056 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 MDFIC2A0A1B0GVS7 189 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 PRSS46E5RG02 174 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 RBFOX2O43251 390 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC47-202ENST00000403162 HPRT1P00492 218 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 TFF1P04155 84 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 STAG3L2P0CL84 134 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 STAG3L3P0CL85 134 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 BMP5P22003 454 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 RAB4BP61018 213 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 SMIM21Q3B7S5 101 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 PDLIM3Q53GG5 364 aaPredicted RBP16.42■□□□□ 0.22
CCDC47-202ENST00000403162 PRORYQ9H606 182 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 FKBP11Q9NYL4 201 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 METRNQ9UJH8 293 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 BOD1L1Q8NFC6 3051 aa16.42■□□□□ 0.22
CCDC47-202ENST00000403162 TRBV20OR9-2A0A075B6H5 130 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 DEFB108AA8MXU0 73 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 LYZL6O75951 148 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 ARL14EPLP0DKL9 152 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 YPEL3P61236 119 aaPredicted RBP16.41■□□□□ 0.22
CCDC47-202ENST00000403162 TPRX1Q8N7U7 411 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 SGMS2Q8NHU3 365 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 RFESDQ8TAC1 157 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 FAM216AQ8WUB2 273 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 CXorf1O96002 111 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 CRYABP02511 175 aaKnown RBP16.41■□□□□ 0.22
CCDC47-202ENST00000403162 VDAC2P45880 294 aaPredicted RBP16.41■□□□□ 0.22
CCDC47-202ENST00000403162 PRAMEF5Q5TYX0 476 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 PRAMEF6Q5VXH4 476 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 MGST2Q99735 147 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 GGTLC1Q9BX51 225 aa16.41■□□□□ 0.22
CCDC47-202ENST00000403162 PATZ1Q9HBE1 687 aaKnown RBP16.41■□□□□ 0.22
CCDC47-202ENST00000403162 GPR12P47775 334 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 PGPEP1LA6NFU8 196 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 FCGR3BO75015 233 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 PROP1O75360 226 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 C1orf194Q5T5A4 169 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 TEX38Q6PEX7 206 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 TGIF2LXQ8IUE1 241 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 TMEM256Q8N2U0 113 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 OR4A16Q8NH70 328 aa16.4■□□□□ 0.22
CCDC47-202ENST00000403162 HCFC1P51610 2035 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 KIR2DL5BA0A0G2JN68 375 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 KIR2DL5BA0A0G2JPC4 375 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 AQP7O14520 342 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 GCH1P30793 250 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 NUTF2P61970 127 aaKnown RBP16.39■□□□□ 0.21
CCDC47-202ENST00000403162 Q6ZT83 130 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 KIR2DL5AQ8N109 375 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 Q8NA96 180 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 MS4A5Q9H3V2 200 aa16.39■□□□□ 0.21
CCDC47-202ENST00000403162 HEYLQ9NQ87 328 aaPredicted RBP16.39■□□□□ 0.21
CCDC47-202ENST00000403162 TRAV9-1A0A075B6T8 112 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 RRHO14718 337 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 EREGO14944 169 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 SCGB1D1O95968 90 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 IGKV3-15P01624 115 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 FOSL1P15407 271 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms