RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 TMEM267Q0VDI3 215 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 CLINT1Q14677 625 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 SPINK9Q5DT21 86 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 ZNF787Q6DD87 383 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 EIF5AL1Q6IS14 154 aaKnown RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 TMEM14EPQ6UXP3 125 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 PUSL1Q8N0Z8 303 aaKnown RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 OR1S2Q8NGQ3 325 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 TMED6Q8WW62 240 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 RPEQ96AT9 228 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 HARBI1Q96MB7 349 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 MS4A7Q9GZW8 240 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 SIRPDQ9H106 197 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 NUP50Q9UKX7 468 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 FOXA2Q9Y261 457 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 POLR3KQ9Y2Y1 108 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 IGHV4-61A0A0C4DH41 118 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 ODF3BA8MYP8 253 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 KBTBD11O94819 623 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 SAA1P0DJI8 122 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 DSCR9P59020 149 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 KLRD1Q13241 179 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 LDLRAD2Q5SZI1 272 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 MOB3BQ86TA1 216 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 PDZD9Q8IXQ8 264 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 PRNDQ9UKY0 176 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 TCF19Q9Y242 345 aa10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 STRAPQ9Y3F4 350 aaKnown RBP10.75□□□□□ -0.69
CEACAM1-206ENST00000403136 IGHV4-30-2A0A087WSY4 118 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 FAM157AC9JC47 383 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 LGALS7P47929 136 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 ZNF266Q14584 549 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 RITA1Q96K30 269 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 OR4C12Q96R67 309 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 GINS3Q9BRX5 216 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 FKBP11Q9NYL4 201 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 OR51B2Q9Y5P1 312 aa10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 USP9YO00507 2555 aaPredicted RBP10.74□□□□□ -0.69
CEACAM1-206ENST00000403136 RNASEK-C17orf49H0YIS7 233 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 FBXO24O75426 580 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 TOX4O94842 621 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 FAM157CP0CG43 387 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 CEACAM3P40198 252 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 DVL1P1P54792 670 aaPredicted RBP10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 HAPLN4Q86UW8 402 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 STPG2Q8N412 459 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 VSTM2AQ8TAG5 236 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 ZNF257Q9Y2Q1 563 aa10.73□□□□□ -0.69
CEACAM1-206ENST00000403136 TEX50A0A1B0GTY4 177 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 DFFBO76075 338 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 KRTAP10-9P60411 292 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HBG1P69891 147 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HBG2P69892 147 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 OR4A5Q8NH83 315 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 TMEM167AQ8TBQ9 72 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 LRRC20Q8TCA0 184 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 TSNAXQ99598 290 aaKnown RBP10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 ATP5SQ99766 215 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 LPAR2Q9HBW0 351 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HEYLQ9NQ87 328 aaPredicted RBP10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 TACC2O95359 2948 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 A0A1W2PRD5 423 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 A0A1W2PRF3 423 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 A0A1W2PRM7 423 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 PMS2P5A8MQ11 134 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 FGF16O43320 207 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 FGF2P09038 288 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 MYOD1P15172 320 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 RPP30P78346 268 aaKnown RBP10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 VMA21Q3ZAQ7 101 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HSD17B11Q8NBQ5 300 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 TBX15Q96SF7 602 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 HILPDAQ9Y5L2 63 aa10.72□□□□□ -0.69
CEACAM1-206ENST00000403136 WNK2Q9Y3S1 2297 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 SPP1P10451 314 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 OR8G2PQ6IF36 304 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 OR5B3Q8NH48 314 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 CXorf58Q96LI9 332 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 RNF5Q99942 180 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 AUP1Q9Y679 476 aa10.71□□□□□ -0.69
CEACAM1-206ENST00000403136 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms