RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 TRAV38-1A0A0B4J264 116 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 OR10A7Q8NGE5 316 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
SIRPA-203ENST00000400068 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 ZDHHC11Q9H8X9 412 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 IQCF6A8MYZ5 107 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
SIRPA-203ENST00000400068 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM37Q8WXS4 190 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 FGF23Q9GZV9 251 aaPredicted RBP11.33□□□□□ -0.6
SIRPA-203ENST00000400068 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
SIRPA-203ENST00000400068 DVL1O14640 695 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 MC5RP33032 325 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 COLCA1Q6ZS62 124 aa11.33□□□□□ -0.6
SIRPA-203ENST00000400068 ZNF48Q96MX3 618 aaPredicted RBP11.33□□□□□ -0.6
SIRPA-203ENST00000400068 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 MLNRO43193 412 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 ADH4P08319 380 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 COL5A1-AS1Q5SY13 56 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 ONECUT1Q9UBC0 465 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
SIRPA-203ENST00000400068 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
SIRPA-203ENST00000400068 HRASP01112 189 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 HTD2P86397 168 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 PPIHO43447 177 aaKnown RBP11.32□□□□□ -0.6
SIRPA-203ENST00000400068 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 IGHV2-70P01814 119 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 DBX2Q6ZNG2 339 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
SIRPA-203ENST00000400068 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 UHRF2Q96PU4 802 aa11.32□□□□□ -0.6
SIRPA-203ENST00000400068 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
SIRPA-203ENST00000400068 FRYLO94915 3013 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 Q6ZRM9 215 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ATG2AQ2TAZ0 1938 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 CCL21O00585 134 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 CEACAM1P13688 526 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 OPRK1P41145 380 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ERHP84090 104 aaKnown RBP11.31□□□□□ -0.6
SIRPA-203ENST00000400068 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 SMIM8Q96KF7 97 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 RPL30P62888 115 aaKnown RBP11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ACSM6Q6P461 480 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 SNX22Q96L94 193 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
SIRPA-203ENST00000400068 ITGB1BP1O14713 200 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 LINC00614P0C842 121 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TFPI2P48307 235 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 RAB7AP51149 207 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 KIAA1456Q9P272 454 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TNCP24821 2201 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 RAB5AP20339 215 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 VSIRQ9H7M9 311 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 GP6Q9HCN6 339 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 FGF16O43320 207 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 HSPB1P04792 205 aaKnown RBP11.3□□□□□ -0.6
SIRPA-203ENST00000400068 CD3EP07766 207 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 CLCF1Q9UBD9 225 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 C9JQL5 133 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 CD40P25942 277 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 GLRXP35754 106 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TIMM23BQ5SRD1 257 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
SIRPA-203ENST00000400068 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 CD1BP29016 333 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 TFF3Q07654 80 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 KCNIP4Q6PIL6 250 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 OR1L6Q8NGR2 347 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 PPIAL4EA0A075B759 164 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 PPIAL4DF5H284 164 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 J3QR06 171 aa11.29□□□□□ -0.6
SIRPA-203ENST00000400068 K7EM74 188 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms