RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 AKR1C3P42330 323 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 ETV3LQ6ZN32 361 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 ZNF695Q8IW36 515 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 PPP1R1CQ8WVI7 109 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 TMPRSS5Q9H3S3 457 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 TNFRSF19Q9NS68 423 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 LSM5Q9Y4Y9 91 aaKnown RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 BTBD17A6NE02 478 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 PRAF2O60831 178 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 IGHV4-38-2P0DP08 117 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 FOLR2P14207 255 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 PAX2Q02962 417 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 MEF2CQ06413 473 aaPredicted RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 RAB32Q13637 225 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 LIAT1Q6ZQX7 453 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 SLC25A48Q6ZT89 311 aaKnown RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 TMEM222Q9H0R3 208 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 OR5AC2Q9NZP5 309 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 H0YIZ8 118 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 SERPINE2P07093 398 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 UCP3P55916 312 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 RPP30P78346 268 aaKnown RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 PAX5Q02548 391 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 EIF4EBP1Q13541 118 aaPredicted RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 UQCC3Q6UW78 93 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 REC114Q7Z4M0 266 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TBX15Q96SF7 602 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TOLLIPQ9H0E2 274 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 HIF1ANQ9NWT6 349 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 MDFIC2A0A1B0GVS7 189 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 ZNF705EA8MWA4 302 aaPredicted RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 TGFAP01135 160 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 PIP4P2Q8N4L2 257 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 OR4P4Q8NGL7 312 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 OR5M8Q8NGP6 311 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 CLCC1Q96S66 551 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TREM1Q9NP99 234 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TRAV40A0A0B4J280 105 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 TOX4O94842 621 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 PJVKQ0ZLH3 352 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
SKA3-203ENST00000400018 UNKLQ9H9P5 680 aaKnown RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 CARHSP1Q9Y2V2 147 aaKnown RBP9.47□□□□□ -0.89
SKA3-203ENST00000400018 MBP02144 154 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.89
SKA3-203ENST00000400018 TAS2R31P59538 309 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 MOB3BQ86TA1 216 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 HIST1H2BAQ96A08 127 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 SCGB3A2Q96PL1 93 aa9.46□□□□□ -0.89
SKA3-203ENST00000400018 IGHV2-70DA0A0C4DH43 119 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 SNAPC5O75971 98 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 USF1P22415 310 aaPredicted RBP9.46□□□□□ -0.9
SKA3-203ENST00000400018 UBA52P62987 128 aaKnown RBP9.46□□□□□ -0.9
SKA3-203ENST00000400018 USF2Q15853 346 aaPredicted RBP9.46□□□□□ -0.9
SKA3-203ENST00000400018 CCDC71LQ8N9Z2 235 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 C18orf12Q96KH6 178 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 CACNG5Q9UF02 275 aa9.46□□□□□ -0.9
SKA3-203ENST00000400018 ANK3Q12955 4377 aaKnown RBP9.45□□□□□ -0.9
SKA3-203ENST00000400018 A0A087X0M5 115 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 A0A096LNT2 108 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 A0A1B0GX30 115 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 RAB29O14966 203 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 RBMXL2O75526 392 aaKnown RBP9.45□□□□□ -0.9
SKA3-203ENST00000400018 YIF1AO95070 293 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 OR9G9P0C7N8 305 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 C7orf69Q9H7B7 122 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 CDS2O95674 445 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 IAPPP10997 89 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 MMP9P14780 707 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 DDTP30046 118 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 TRAT1Q6PIZ9 186 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 RRNAD1Q96FB5 475 aaKnown RBP9.45□□□□□ -0.9
SKA3-203ENST00000400018 GALNT14Q96FL9 552 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 DUX5Q96PT3 197 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 ATG101Q9BSB4 218 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
SKA3-203ENST00000400018 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 SIRPDQ9H106 197 aa9.45□□□□□ -0.9
SKA3-203ENST00000400018 JMJD1CQ15652 2540 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms