RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 TAAR6Q96RI8 345 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 SIAH2O43255 324 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 CXorf1O96002 111 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
APOB-202ENST00000399256 PCP4P48539 62 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 LGALS4P56470 323 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 MMDQ15546 238 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 LPAL2Q16609 132 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 LTC4SQ16873 150 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 SPATA31B1PQ5VZV4 182 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 SSTR5P35346 364 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 GABRA2P47869 451 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 TMEM249Q2WGJ8 235 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 KIAA1644Q3SXP7 199 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 FAM234AQ9H0X4 552 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 GNB4Q9HAV0 340 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 BOKQ9UMX3 212 aaPredicted RBP11.63□□□□□ -0.55
APOB-202ENST00000399256 FAM186AA6NE01 2351 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 OPRK1P41145 380 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 ZNF718Q3SXZ3 478 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 ZNF826PQ6ZT77 177 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 OR8I2Q8N0Y5 310 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
APOB-202ENST00000399256 CELA3BP08861 270 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 CHRNB4P30926 498 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 SLC35B1P78383 322 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 RPEL1Q2QD12 228 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 MMD2Q8IY49 270 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
APOB-202ENST00000399256 TBL2Q9Y4P3 447 aaKnown RBP11.62□□□□□ -0.55
APOB-202ENST00000399256 OOEPA6NGQ2 149 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 FOXH1O75593 365 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 PMCHP20382 165 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 MAGEA5P43359 124 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 Q6ZR03 302 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 Q8N976 141 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 ST6GALNAC3Q8NDV1 305 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 HTD2P86397 168 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 TRA2AQ13595 282 aaKnown RBP eCLIP11.62□□□□□ -0.55
APOB-202ENST00000399256 ZNF703Q9H7S9 590 aaPredicted RBP11.62□□□□□ -0.55
APOB-202ENST00000399256 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
APOB-202ENST00000399256 A8MXE2 369 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 GPX1P07203 203 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 GCHFRP30047 84 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 Q0VG73 95 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 OR1C1Q15619 314 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 PRAMEF5Q5TYX0 476 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 PRAMEF6Q5VXH4 476 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 COQ2Q96H96 371 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 TXNDC17Q9BRA2 123 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
APOB-202ENST00000399256 FCGR3BO75015 233 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 AMTP48728 403 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 ABHD12Q8N2K0 398 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 OR4B1Q8NGF8 309 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 RCHY1Q96PM5 261 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 GP6Q9HCN6 339 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 FOXJ2Q9P0K8 574 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 NAT8BQ9UHF3 227 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 ZFP30Q9Y2G7 519 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 LOXL2Q9Y4K0 774 aa11.61□□□□□ -0.55
APOB-202ENST00000399256 CER1O95813 267 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
APOB-202ENST00000399256 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
APOB-202ENST00000399256 SLC35E1Q96K37 410 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 MPDU1O75352 247 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 TCL1AP56279 114 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 STPG4Q8N801 248 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 OR13A1Q8NGR1 328 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 GMPPAQ96IJ6 420 aaPredicted RBP11.6□□□□□ -0.55
APOB-202ENST00000399256 DCTN5Q9BTE1 182 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 V9GYV3 84 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 DNAJC13O75165 2243 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 FOXF2Q12947 444 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 RNF2Q99496 336 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
APOB-202ENST00000399256 TRAV3A0A0B4J244 114 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 FXYD3Q14802 87 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 C1orf174Q8IYL3 243 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 STARD4Q96DR4 205 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 UHRF2Q96PU4 802 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
APOB-202ENST00000399256 PCSK5Q92824 1860 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 IGHV3-13P01766 116 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 IGHV3-7P01780 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms