RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BORCS5Q969J3 196 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RBM38Q9H0Z9 239 aaKnown RBP10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 GABARAPH6UMI1 98 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 GPR31O00270 319 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RBFOX2O43251 390 aaKnown RBP eCLIP10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 S1PR2O95136 353 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 HPRT1P00492 218 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MYOD1P15172 320 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RPA2P15927 270 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RUNX1Q01196 453 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PDLIM3Q53GG5 364 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RNASE10Q5GAN6 216 aaKnown RBP10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR4A47Q6IF82 309 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CMTM1Q8IZ96 169 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR1N2Q8NGR9 330 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MCFD2Q8NI22 146 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 VSTM2AQ8TAG5 236 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TMEM167AQ8TBQ9 72 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SLA2Q9H6Q3 261 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TRAV3A0A0B4J244 114 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CREBL2O60519 120 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RBMXL2O75526 392 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 IFNA6P05013 189 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 HOXD3P31249 432 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TNFSF8P32971 234 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 ZNF616Q08AN1 781 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SMIM4Q8WVI0 70 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 DGCR14Q96DF8 476 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RSRP1Q9BUV0 290 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 NXF2Q9GZY0 626 aaKnown RBP10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 HRASLSQ9HDD0 168 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 COA4Q9NYJ1 87 aa10.9□□□□□ -0.66
HLA-DQB1-202ENST00000399079 A0A1B0GW64 132 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MPPED1O15442 326 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PRH1P02810 166 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 NQO2P16083 231 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 F2RP25116 425 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TAS2R31P59538 309 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RPL8P62917 257 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 FAAP20Q6NZ36 180 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TMEM229BQ8NBD8 167 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ADAD2Q8NCV1 583 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 CD300LFQ8TDQ1 290 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PLEKHA2Q9HB19 425 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 BET1LQ9NYM9 111 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RSL24D1Q9UHA3 163 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 A0A087WW49 117 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TEX22C9J3V5 150 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 H3BUA1 57 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RAB3DO95716 219 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 CD74P04233 296 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR9G9P0C7N8 305 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PI3P19957 117 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 LPAR6P43657 344 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 UCP3P55916 312 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TAS2R19P59542 299 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 KRTAP10-11P60412 298 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 STEAP1BQ6NZ63 245 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 LPCAT3Q6P1A2 487 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TBC1D26Q86UD7 250 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 LHFPL1Q86WI0 220 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DMBX1Q8NFW5 382 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DPF1Q92782 380 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 FYTTD1Q96QD9 318 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TMEM140Q9NV12 185 aa10.89□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 CTDSPLO15194 276 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 KRASP01116 189 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 HLA-GP17693 338 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TBPP20226 339 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RPL27AP46776 148 aaKnown RBP10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SLURP1P55000 103 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 POU2AF1Q16633 256 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SCGB2B2Q4G0G5 96 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ARRDC1Q8N5I2 433 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SOSTQ9BQB4 213 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 AIFM2Q9BRQ8 373 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 AURKAIP1Q9NWT8 199 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB1-202ENST00000399079 C13orf42A0A1B0GVH6 325 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 FABP12A6NFH5 140 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 CGB1A6NKQ9 187 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 LINC01619G3V211 115 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 UPK2O00526 184 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF735P0CB33 412 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PGAM2P15259 253 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms