RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 JKAMPQ9P055 326 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 METTL1Q9UBP6 276 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 RPUSD1Q9UJJ7 312 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 PRSS46E5RG02 174 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 CLDN34H7C241 214 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 THBDP07204 575 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 NDUFB7P17568 137 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 MEOX2P50222 304 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 TREML4Q6UXN2 200 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
PRAME-202ENST00000398743 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
PRAME-202ENST00000398743 TGIF2-C20orf24A0A0A6YYL0 155 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 TRAV38-1A0A0B4J264 116 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 SEC14L6B5MCN3 397 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 MMP23AO75900 390 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 KBTBD11O94819 623 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 HRASP01112 189 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 DEFA4P12838 97 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 ZNF674Q2M3X9 581 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 CYP2G1PQ6ZSU1 146 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 SPACA3Q8IXA5 215 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 SNRNP40Q96DI7 357 aaKnown RBP11.37□□□□□ -0.59
PRAME-202ENST00000398743 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 AP4M1O00189 453 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 S100A8P05109 93 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 OPRK1P41145 380 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
PRAME-202ENST00000398743 OR4F5Q8NH21 305 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 RAB1CQ92928 201 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
PRAME-202ENST00000398743 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 MS4A5Q9H3V2 200 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 SAP30LQ9HAJ7 183 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
PRAME-202ENST00000398743 SLC25A10Q9UBX3 287 aaPredicted RBP11.37□□□□□ -0.59
PRAME-202ENST00000398743 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
PRAME-202ENST00000398743 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 DSCAMO60469 2012 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 RND2P52198 227 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 FOXC1Q12948 553 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 POU2AF1Q16633 256 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 TMEM241Q24JQ0 296 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 ASCL5Q7RTU5 278 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 ZCCHC24Q8N2G6 241 aaKnown RBP11.36□□□□□ -0.59
PRAME-202ENST00000398743 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 ZCCHC14Q8WYQ9 949 aaKnown RBP11.36□□□□□ -0.59
PRAME-202ENST00000398743 CTDSP1Q9GZU7 261 aa11.36□□□□□ -0.59
PRAME-202ENST00000398743 RAI1Q7Z5J4 1906 aaPredicted RBP11.36□□□□□ -0.59
PRAME-202ENST00000398743 A0A1W2PPV4 95 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 NPY1RP25929 384 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 ADIRFQ15847 76 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 TBR1Q16650 682 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 RTL8BQ17RB0 113 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 OR10A7Q8NGE5 316 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 MGST2Q99735 147 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 PARLQ9H300 379 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 VSTM5A8MXK1 200 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 PAGE4O60829 102 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 CT45A6P0DMU7 189 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 CT45A5P0DMU8 189 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 CT45A7P0DMV0 189 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 RPL31P62899 125 aaKnown RBP11.35□□□□□ -0.59
PRAME-202ENST00000398743 MEF2CQ06413 473 aaPredicted RBP11.35□□□□□ -0.59
PRAME-202ENST00000398743 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
PRAME-202ENST00000398743 GGTLC1Q9BX51 225 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 GVINP1Q7Z2Y8 2422 aa11.35□□□□□ -0.59
PRAME-202ENST00000398743 PPIAL4EA0A075B759 164 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PPIAL4DF5H284 164 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 OPN1MWP04001 364 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PPIAL4FP0DN26 164 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 OPN1MW2P0DN77 364 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 OPN1MW3P0DN78 364 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 OR13D1Q8NGV5 346 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 NEIL1Q96FI4 390 aaPredicted RBP11.34□□□□□ -0.59
PRAME-202ENST00000398743 TCEAL7Q9BRU2 100 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 SLC35D1Q9NTN3 355 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PPIAL4AQ9Y536 164 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 OR51B2Q9Y5P1 312 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PXMP4Q9Y6I8 212 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms