RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 C19orf25Q9UFG5 118 aaPredicted RBP12.63□□□□□ -0.39
CYLD-202ENST00000398568 IGKV3D-11A0A0A0MRZ8 115 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 G3V4G9 280 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 K7EN84 100 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 TMEM108Q6UXF1 575 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 KNTC1P50748 2209 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
CYLD-202ENST00000398568 WDFY3Q8IZQ1 3526 aa12.63□□□□□ -0.39
CYLD-202ENST00000398568 GNG7O60262 68 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 CD27P26842 260 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 TMEM249Q2WGJ8 235 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 RHBDD2Q6NTF9 364 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 RAB1CQ92928 201 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 TRAV8-6A0A0B4J262 113 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 CXorf1O96002 111 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 IGLC1P0CG04 106 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
CYLD-202ENST00000398568 TNFSF11O14788 317 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 BCL3P20749 454 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 NPY1RP25929 384 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 TNXAQ16473 311 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
CYLD-202ENST00000398568 OR5A2Q8NGI9 324 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 HS3ST3A1Q9Y663 406 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 V9GYV3 84 aa12.62□□□□□ -0.39
CYLD-202ENST00000398568 OR4C46A6NHA9 309 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 SF3B5Q9BWJ5 86 aaKnown RBP12.61□□□□□ -0.39
CYLD-202ENST00000398568 SERTAD4Q9NUC0 356 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 CNTRLQ7Z7A1 2325 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 MT-CO2P00403 227 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
CYLD-202ENST00000398568 PDLIM3Q53GG5 364 aaPredicted RBP12.61□□□□□ -0.39
CYLD-202ENST00000398568 EBLN2Q6P2I7 272 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 OR8B3Q8NGG8 313 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 OR1N2Q8NGR9 330 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 OR8B2Q96RD0 313 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 ULBP2Q9BZM5 246 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 A0A1B0GV72 72 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 VAMP5O95183 116 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
CYLD-202ENST00000398568 NPIPA3F8WFD2 350 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 TBR1Q16650 682 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 C9JCJ5 164 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 GNG4P50150 75 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 C10orf128Q5T292 105 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 OR1F12Q8NHA8 337 aa12.6□□□□□ -0.39
CYLD-202ENST00000398568 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
CYLD-202ENST00000398568 GOSR1O95249 250 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 ZNF585BQ52M93 769 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 C18orf32Q8TCD1 76 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 NABP1Q96AH0 204 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 G3V3Y1 287 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 MGST1P10620 155 aaKnown RBP12.59□□□□□ -0.39
CYLD-202ENST00000398568 GABRA6Q16445 453 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 METTL7AQ9H8H3 244 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 OR51B2Q9Y5P1 312 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 HAND1O96004 215 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 CELA3BP08861 270 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 FBLP22087 321 aaKnown RBP12.59□□□□□ -0.39
CYLD-202ENST00000398568 SSTR5P35346 364 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 YPEL5P62699 121 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 FXYD3Q14802 87 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 DEFB133Q30KQ1 61 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 TIGITQ495A1 244 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 TCF24Q7RTU0 167 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 MKXQ8IYA7 352 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 ZNF391Q9UJN7 358 aa12.59□□□□□ -0.39
CYLD-202ENST00000398568 C7orf71A4D174 169 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 C9orf172C9J069 976 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 ZG16O60844 167 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 FGF12P61328 243 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 TRIP6Q15654 476 aaKnown RBP12.58□□□□□ -0.4
CYLD-202ENST00000398568 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 PILRBQ9UKJ0 227 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 TRGV10A0A0A0MS01 117 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
CYLD-202ENST00000398568 LGALS7P47929 136 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 CCR5P51681 352 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 CRYGSP22914 178 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
CYLD-202ENST00000398568 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms