RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 PRR19A6NJB7 356 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 ZNF56Q15929 161 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 RNASEH2CQ8TDP1 164 aaKnown RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 RARRES2Q99969 163 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 MYH14Q7Z406 1995 aaKnown RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CDK5RAP2Q96SN8 1893 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 IGKV3D-11A0A0A0MRZ8 115 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CSRP1P21291 193 aaKnown RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CRYBB3P26998 211 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 FAM57AQ8TBR7 257 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CHCHD2Q9Y6H1 151 aaPredicted RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 PRRC2BQ5JSZ5 2229 aaKnown RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 KNL1Q8NG31 2342 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 KLK2P20151 261 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 SRIP30626 198 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 FER1L6Q2WGJ9 1857 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 NHLRC3Q5JS37 347 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 TCF23Q7RTU1 214 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 APCDD1LQ8NCL9 501 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 NPCDR1Q9BY65 106 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 LOC101059948A0A1B0GTJ6 334 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 H3BRM9 83 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 HIST1H1AQ02539 215 aaPredicted RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 MEIG1Q5JSS6 88 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CACNG8Q8WXS5 425 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 PARLQ9H300 379 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 TMEM74BQ9NUR3 256 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 FOXJ2Q9P0K8 574 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 PF4P02776 101 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 TAS2R60P59551 318 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CFHR1Q03591 330 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 EGR4Q05215 589 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 LINC00305Q7Z4B0 112 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 CENPVQ7Z7K6 275 aaPredicted RBP5.3□□□□□ -1.56
PGBD4-201ENST00000397766 LRTM2Q8N967 370 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 OR4D5Q8NGN0 318 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 DPM3Q9P2X0 92 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 TAF1P21675 1872 aa5.3□□□□□ -1.56
PGBD4-201ENST00000397766 FAM186AA6NE01 2351 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 TCF21O43680 179 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 PLAUP00749 431 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 TMEM183AQ8IXX5 376 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 DMRT1Q9Y5R6 373 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 NPIPB9F8W1W9 429 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 GHRHP01286 108 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 IL4P05112 153 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 SOD3P08294 240 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 LEPP41159 167 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 PLP1P60201 277 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 ARF6P62330 175 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 ZNF385CQ66K41 422 aaPredicted RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 LINC00312Q9Y6C7 94 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 KBTBD11-OT1A0A1B0GTJ5 212 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 H0YL77 283 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 NPIPB7O75200 414 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 ATP5LO75964 103 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 EAF1Q96JC9 268 aaPredicted RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 PRELID3AQ96N28 172 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 FOCADQ5VW36 1801 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 IQCF6A8MYZ5 107 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 CEACAM4O75871 244 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 MOSP00540 346 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 TRGV3P03979 118 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 IL36BQ9NZH7 164 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 CARHSP1Q9Y2V2 147 aaKnown RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 XIRP1Q702N8 1843 aaKnown RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 TRBV20OR9-2A0A075B6H5 130 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 FAM90A9PA6NNJ1 464 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 STAG3L3P0CL85 134 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 H2BFSP57053 126 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 ACSF3Q4G176 576 aaPredicted RBP5.29□□□□□ -1.56
PGBD4-201ENST00000397766 CENPWQ5EE01 88 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 GOLT1AQ6ZVE7 132 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 FAM131CQ96AQ9 280 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 C2orf88Q9BSF0 95 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 CHODLQ9H9P2 273 aa5.29□□□□□ -1.56
PGBD4-201ENST00000397766 SMIM13P0DJ93 91 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 TGIF1Q15583 401 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 LINC00114Q6XXX2 140 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 SPOCK3Q9BQ16 436 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 VCX2Q9H322 139 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 TNFRSF18Q9Y5U5 241 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 SPTAN1Q13813 2472 aaKnown RBP5.28□□□□□ -1.56
PGBD4-201ENST00000397766 IGHV3OR16-12A0A075B7B8 117 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 A0A087WWC5 75 aa5.28□□□□□ -1.56
PGBD4-201ENST00000397766 F12P00748 615 aaPredicted RBP5.28□□□□□ -1.56
PGBD4-201ENST00000397766 PRSS2P07478 247 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms