RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 DIRC2Q96SL1 478 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 FAM90A9PA6NNJ1 464 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 NUDT3O95989 172 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 DEFA4P12838 97 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM30BQ3MIR4 351 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM14EPQ6UXP3 125 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 OR2M7Q8NG81 312 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 RNASEH2CQ8TDP1 164 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 MBNL3Q9NUK0 354 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 HTTP42858 3142 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 LRP4O75096 1905 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 UNQ5815/PRO19632Q6UWF5 114 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 FLYWCH2Q96CP2 140 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 NUDT11Q96G61 164 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 C17orf51A8MQB3 221 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 LEPROTL1O95214 131 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 WISP1O95388 367 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 COX6A1P12074 109 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 GFRA1P56159 465 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 PSG4Q00888 419 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF818PQ6ZRF7 136 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 GBGT1Q8N5D6 347 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TAAR3PQ9P1P4 343 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ARF6P62330 175 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 C1orf194Q5T5A4 169 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PMS2CLQ68D20 193 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 CDPF1Q6NVV7 123 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 FAM19A2Q8N3H0 131 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 LIME1Q9H400 295 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM106BQ9NUM4 274 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 HILPDAQ9Y5L2 63 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 WNK2Q9Y3S1 2297 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 DNAJC13O75165 2243 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 HLA-DQA1P01909 254 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 POM121L2Q96KW2 1035 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF488Q96MN9 340 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ZNHIT1O43257 154 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PGLYRP1O75594 196 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM50AO95807 157 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 CD1BP29016 333 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SLC23A3Q6PIS1 610 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 RPRMQ9NS64 109 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 LOC389332A0A1B0GUA5 103 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ERHP84090 104 aaKnown RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SNAI3Q3KNW1 292 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SSBP3Q9BWW4 388 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 EML5Q05BV3 1969 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PTPRZ1P23471 2315 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 OTOGLQ3ZCN5 2332 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 A8MWP6 167 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 H3BUT2 72 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SCTP09683 121 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 OPRK1P41145 380 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ALKBH6Q3KRA9 238 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 TEX38Q6PEX7 206 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 DEFB108BQ8NET1 73 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 OR1L4Q8NGR5 311 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SFXN3Q9BWM7 321 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PLA2G2EQ9NZK7 142 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PXMP4Q9Y6I8 212 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ROS1P08922 2347 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 COL5A1P20908 1838 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-205ENST00000397611 IGHV5-10-1A0A0J9YXX1 117 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 ITGB1BP1O14713 200 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 PAX1P15863 534 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 DCAF10Q5QP82 559 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 SLC35E4Q6ICL7 350 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 GLRX2Q9NS18 164 aa4.62□□□□□ -1.67
PTPRD-205ENST00000397611 IGHV1-45A0A0A0MS14 117 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 K7ESF4 209 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMPRSS2O15393 492 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 WISP2O76076 250 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 RPL7P18124 248 aaKnown RBP4.61□□□□□ -1.67
PTPRD-205ENST00000397611 LRRC75BQ2VPJ9 315 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TM4SF20Q53R12 229 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 C1orf185Q5T7R7 199 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 DMRTC2Q8IXT2 367 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM171Q8WVE6 324 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PROK2Q9HC23 129 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 HES4Q9HCC6 221 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 NRN1Q9NPD7 142 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 A0A1B0GWJ7 208 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 IFNL4K9M1U5 179 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 NDUFS8O00217 210 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 GZMBP10144 247 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 ORM2P19652 201 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 CFHR2P36980 270 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 CYB561P49447 251 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 PSMB2P49721 201 aa4.61□□□□□ -1.67
PTPRD-205ENST00000397611 NUBP1P53384 320 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms