RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PNMA8CA0A1B0GUJ8 204 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 FOXI3A8MTJ6 420 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 DIRAS3O95661 229 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 SAA1P0DJI8 122 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 CELP19835 753 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 GALP22466 123 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 DUTP33316 252 aaKnown RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 ELLP55199 621 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 TMEM50BP56557 158 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 SPCS2Q15005 226 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 CEACAM19Q7Z692 300 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 LRRTM1Q86UE6 522 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 PHYHIPQ92561 330 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 TMEM80Q96HE8 168 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 CMSS1Q9BQ75 279 aaKnown RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 URM1Q9BTM9 101 aaKnown RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 CABLES2Q9BTV7 478 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 C9orf16Q9BUW7 83 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 KCNK15Q9H427 330 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 C5orf66Q9H5L9 145 aa6.93□□□□□ -1.3
NEDD9-203ENST00000397378 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
NEDD9-203ENST00000397378 TRBV6-7A0A0A0MS04 114 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 LINC00473A8K010 186 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 TEX22C9J3V5 150 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 TSPAN4O14817 238 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 FABP7O15540 132 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 CIB2O75838 187 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 PSMB6P28072 239 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 ZFP1Q6P2D0 407 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 OR10J5Q8NHC4 309 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 FBLIM1Q8WUP2 373 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 EEF1AKMT3Q96AZ1 226 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 GALNT14Q96FL9 552 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 FYTTD1Q96QD9 318 aaKnown RBP6.92□□□□□ -1.3
NEDD9-203ENST00000397378 C11orf68Q9H3H3 251 aaKnown RBP6.92□□□□□ -1.3
NEDD9-203ENST00000397378 MAP6D1Q9H9H5 199 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 PPP1R14DQ9NXH3 145 aa6.92□□□□□ -1.3
NEDD9-203ENST00000397378 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 EFCAB10A6NFE3 127 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 HMX3A6NHT5 357 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 BET1O15155 118 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ATP5HO75947 161 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 DHFRP00374 187 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 IGHV3-23P01764 117 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 CRYGCP07315 174 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 CD3GP09693 182 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 GSTT2P0CG29 244 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 GSTT2BP0CG30 244 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 MYOD1P15172 320 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 HIST1H1BP16401 226 aaKnown RBP6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ST3GAL4Q11206 333 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 MED22Q15528 200 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ODF3L2Q3SX64 289 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ZNF585BQ52M93 769 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ACSM3Q53FZ2 586 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 IGSF11Q5DX21 431 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 SOHLH1Q5JUK2 328 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 RBM48Q5RL73 367 aaKnown RBP6.91□□□□□ -1.3
NEDD9-203ENST00000397378 UNQ9165/PRO28630Q6UXU0 137 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 SPARTQ8N0X7 666 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 OR6M1Q8NGM8 313 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 ARHGAP5-AS1Q96IT6 56 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 PECRQ9BY49 303 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 UBQLN2Q9UHD9 624 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 UFC1Q9Y3C8 167 aa6.91□□□□□ -1.3
NEDD9-203ENST00000397378 DPPA5A6NC42 116 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 CDK1P06493 297 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 IL6RP08887 468 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-203ENST00000397378 ZNF735P0CB33 412 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 RPL35AP18077 110 aaKnown RBP6.9□□□□□ -1.3
NEDD9-203ENST00000397378 FCGR2BP31994 310 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-203ENST00000397378 MAS1LP35410 378 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 RPL27AP46776 148 aaKnown RBP6.9□□□□□ -1.3
NEDD9-203ENST00000397378 MFAP2P55001 183 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 WNT4P56705 351 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 INSL4Q14641 139 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 C19orf35Q6ZS72 473 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 MS4A15Q8N5U1 240 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 SETD9Q8NE22 299 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 ZNF555Q8NEP9 628 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 CXorf58Q96LI9 332 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 RARRES2Q99969 163 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 OR51E2Q9H255 320 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 RBM7Q9Y580 266 aaKnown RBP6.9□□□□□ -1.3
NEDD9-203ENST00000397378 S4R3C0 116 aa6.9□□□□□ -1.3
NEDD9-203ENST00000397378 IGLV11-55A0A075B6I3 123 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 A0A1B0GW64 132 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 MFSD2BA6NFX1 497 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 E7EUB6 86 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 S1PR2O95136 353 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 CLEC3BP05452 202 aa6.89□□□□□ -1.31
NEDD9-203ENST00000397378 FCGR3AP08637 254 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms