RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 C5orf30Q96GV9 206 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 GFI1Q99684 422 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 GINS4Q9BRT9 223 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 ST6GALNAC5Q9BVH7 336 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 GGTLC1Q9BX51 225 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF257Q9Y2Q1 563 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 LSM2Q9Y333 95 aaKnown RBP6.56□□□□□ -1.36
CAPN3-208ENST00000397204 AK6Q9Y3D8 172 aaKnown RBP6.56□□□□□ -1.36
CAPN3-208ENST00000397204 LOC102724200A0A096LPH7 203 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-208ENST00000397204 TRAV25A0A0B4J276 109 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 LINC00473A8K010 186 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 PPP5D1E7EU14 171 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 OR2J3O76001 311 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 SLC22A5O76082 557 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 NDUFB8O95169 186 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 LY6G6CO95867 125 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 HLA-AP01891 365 aaKnown RBP6.55□□□□□ -1.36
CAPN3-208ENST00000397204 GADD45AP24522 165 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 PSMA1P25786 263 aaKnown RBP6.55□□□□□ -1.36
CAPN3-208ENST00000397204 MED22Q15528 200 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 KLK9Q2XQG4 91 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 LIPKQ5VXJ0 399 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF57Q68EA5 555 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-208ENST00000397204 OR4A47Q6IF82 309 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 IDO2Q6ZQW0 420 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 OR52B4Q8NGK2 314 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 UFD1Q92890 307 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 WFDC10AQ9H1F0 79 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 OR51E2Q9H255 320 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 FBXL7Q9UJT9 491 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 TP53TG1Q9Y2A0 90 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 PRELID3BQ9Y3B1 194 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 V9GY05 133 aa6.55□□□□□ -1.36
CAPN3-208ENST00000397204 TMEM272A0A1B0GTI8 110 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF320A2RRD8 509 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 DPPA5A6NC42 116 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 CXorf65A6NEN9 183 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 NUPR2A6NF83 97 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 NPIPB5A8MRT5 1133 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 FCGR3BO75015 233 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 DHFRP00374 187 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 CRYGCP07315 174 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 IL6RP08887 468 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-208ENST00000397204 CTXN2P0C2S0 81 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 SAA1P0DJI8 122 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-208ENST00000397204 HIST1H1BP16401 226 aaKnown RBP6.54□□□□□ -1.36
CAPN3-208ENST00000397204 MAS1LP35410 378 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 TALDO1P37837 337 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 CLDN12P56749 244 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 TNFRSF9Q07011 255 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 IRF3Q14653 427 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-208ENST00000397204 Q6ZWC4 215 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 H1FOOQ8IZA3 346 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-208ENST00000397204 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 UXS1Q8NBZ7 420 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 OR10R2Q8NGX6 335 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 MARC2Q969Z3 335 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 DCUN1D5Q9BTE7 237 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 SLC2A9Q9NRM0 540 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
CAPN3-208ENST00000397204 METTL21EPA6NDL7 271 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 HMX3A6NHT5 357 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 A8MWP6 167 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 RAB27BO00194 218 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 UBE2CO00762 179 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 HLA-DQB1P01920 261 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 C8orf88P0DMB2 117 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 GNB3P16520 340 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 PI3P19957 117 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 GALP22466 123 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 PSMB6P28072 239 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 BMI1P35226 326 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 ARL3P36405 182 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 RPL27AP46776 148 aaKnown RBP6.53□□□□□ -1.36
CAPN3-208ENST00000397204 ARL6IP1Q15041 203 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 C10orf55Q5SWW7 151 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 CLEC19AQ6UXS0 136 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 RBPMS2Q6ZRY4 209 aaKnown RBP6.53□□□□□ -1.36
CAPN3-208ENST00000397204 SLC38A6Q8IZM9 456 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF645Q8N7E2 425 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 MAFIPQ8WZ33 124 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 FYTTD1Q96QD9 318 aaKnown RBP6.53□□□□□ -1.36
CAPN3-208ENST00000397204 OR2A7Q96R45 310 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 ACOT13Q9NPJ3 140 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 MLXQ9UH92 298 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 MRPS7Q9Y2R9 242 aaKnown RBP6.53□□□□□ -1.36
CAPN3-208ENST00000397204 KLK5Q9Y337 293 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-208ENST00000397204 OR2W1Q9Y3N9 320 aa6.53□□□□□ -1.36
CAPN3-208ENST00000397204 TRBV7-1A0A0A6YYK4 115 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 TRAV1-2A0A0B4J238 106 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 TMEM213A2RRL7 107 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 EBAG9O00559 213 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 MFNGO00587 321 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms