RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 ZNF429Q86V71 674 aa10.78□□□□□ -0.68
HLA-DMA-203ENST00000395305 SLC25A42Q86VD7 318 aa10.78□□□□□ -0.68
HLA-DMA-203ENST00000395305 SNX29P2Q8IUI4 249 aa10.78□□□□□ -0.68
HLA-DMA-203ENST00000395305 TTC9CQ8N5M4 171 aa10.78□□□□□ -0.68
HLA-DMA-203ENST00000395305 CD300LFQ8TDQ1 290 aa10.78□□□□□ -0.68
HLA-DMA-203ENST00000395305 COL7A1Q02388 2944 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM25AB3EWG3 89 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM25CB3EWG5 89 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM25GB3EWG6 89 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 PGLYRP1O75594 196 aaPredicted RBP10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 HPRT1P00492 218 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 APELAP0DMC3 54 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 HLA-DMAP28067 261 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 HRH1P35367 487 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 TAS2R31P59538 309 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 DCTN2Q13561 401 aaKnown RBP10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 TMEM17Q86X19 198 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
HLA-DMA-203ENST00000395305 SORL1Q92673 2214 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 TRBV9A0A0B4J1U6 114 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 IL6RP08887 468 aaPredicted RBP10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZNF735P0CB33 412 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 NQO2P16083 231 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZP3P21754 424 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 RCVRNP35243 200 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 ECI1P42126 302 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 RPL27AP46776 148 aaKnown RBP10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 TSPAN5P62079 268 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 ACSM6Q6P461 480 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 CMTM1Q8IZ96 169 aa10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
HLA-DMA-203ENST00000395305 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 TEX22C9J3V5 150 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 F2RP25116 425 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 AADACL3Q5VUY0 350 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 OR51H1Q8NH63 302 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 C15orf40Q8WUR7 153 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 BCL7BQ9BQE9 202 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
HLA-DMA-203ENST00000395305 HMX3A6NHT5 357 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 NPIPB5A8MRT5 1133 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 E7EUB6 86 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 GPR31O00270 319 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 UPK2O00526 184 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 SAP30O75446 220 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 RBMXL2O75526 392 aaKnown RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 FGF2P09038 288 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 HLA-GP17693 338 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 TMBIM6P55061 237 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 UCP3P55916 312 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 RHOGP84095 191 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZNF45Q02386 682 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 SPCS2Q15005 226 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 CLVS1Q8IUQ0 354 aaPredicted RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 CADM3Q8N126 398 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 RAB2BQ8WUD1 216 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 FYTTD1Q96QD9 318 aaKnown RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 ELOVL1Q9BW60 279 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 HRASLSQ9HDD0 168 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 EXTL2Q9UBQ6 330 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZNF256Q9Y2P7 627 aaPredicted RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
HLA-DMA-203ENST00000395305 A0A1B0GW64 132 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 DPPA5A6NC42 116 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 PRH1P02810 166 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 CRYGCP07315 174 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 S100GP29377 79 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 RPL5P46777 297 aaKnown RBP10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 KLK9Q2XQG4 91 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 OR4C12Q96R67 309 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 PRR25Q96S07 402 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 ABHD1Q96SE0 405 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 RSRP1Q9BUV0 290 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 FXYD6Q9H0Q3 95 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 FAM212BQ9NTI7 297 aaPredicted RBP10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 COMMD9Q9P000 198 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 KLK11Q9UBX7 282 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 MTFP1Q9UDX5 166 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 KLK9Q9UKQ9 250 aa10.73□□□□□ -0.69
HLA-DMA-203ENST00000395305 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
HLA-DMA-203ENST00000395305 CTDSP2O14595 271 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms