RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.865e-7■■■■■ 33
HERC4-204ENST00000395198 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 MS4A13Q5J8X5 152 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 MRPL55Q7Z7F7 128 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 C11orf53Q8IXP5 236 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 TMEM106AQ96A25 262 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 CACNA1HO95180 2353 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 C1QL1O75973 258 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DUS4LO95620 317 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 TNFP01375 233 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 HLA-DQB2P05538 268 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 RND2P52198 227 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 AKR1C1Q04828 323 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 Q6AWC8 147 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SFRP4Q6FHJ7 346 aaPredicted RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 UNQ9165/PRO28630Q6UXU0 137 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 ZNF843Q8N446 348 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 STARD4Q96DR4 205 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 CHST6Q9GZX3 395 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 PDFQ9HBH1 243 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 PROCRQ9UNN8 238 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DENND4CQ5VZ89 1909 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 A0A0A6YYD4 124 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 IGHV1-69-2A0A0G2JMI3 117 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 MYL12BO14950 172 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 COX5AP20674 150 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SSR2P43308 183 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 ACACAQ13085 2346 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SLC25A30Q5SVS4 291 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 FRG2Q64ET8 278 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 PVRIGQ6DKI7 326 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 S100A13Q99584 98 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SIGLEC7Q9Y286 467 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SOX21Q9Y651 276 aaPredicted RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 SEC16AO15027 2179 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 PRRG2O14669 202 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 OVOL1O14753 267 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 MED14OSP0DP75 135 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 THBS3P49746 956 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DAZ2Q13117 558 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 GSG1Q2KHT4 349 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 TSPO2Q5TGU0 170 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 LCN12Q6JVE5 192 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 HEPN1Q6WQI6 88 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DAZ4Q86SG3 579 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 LRP11Q86VZ4 500 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SFTPA1Q8IWL2 248 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 FTMTQ8N4E7 242 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 CT55Q8WUE5 264 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 TFAP2CQ92754 450 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DPY30Q9C005 99 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 DAZ1Q9NQZ3 744 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 DAZ3Q9NR90 486 aaKnown RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 KCNIP2Q9NS61 270 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 RARRES3Q9UL19 164 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 PYGO1Q9Y3Y4 419 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 KIF26AQ9ULI4 1882 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 NUP205Q92621 2012 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 BDP1A6H8Y1 2624 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 OR2T8A6NH00 312 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 PAX4O43316 350 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 POLR2IP36954 125 aaKnown RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 XAF1Q6GPH4 301 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 ZNF793Q6ZN11 406 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 TMUB2Q71RG4 321 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 COX18Q8N8Q8 333 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 LRRC61Q9BV99 259 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 OR10A2Q9H208 303 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 POMKQ9H5K3 350 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 EHFQ9NZC4 300 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 PAM16Q9Y3D7 125 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SPTAN1Q13813 2472 aaKnown RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 EP400Q96L91 3159 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 A0A0D9SEW6 157 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 MUC21A0A0G2JKD1 596 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 G3V3Q6 166 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 M0R129 80 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 GPX1P07203 203 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 ATP5G2Q06055 141 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 RARRES2Q99969 163 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 TMEM204Q9BSN7 226 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SAMD10Q9BYL1 202 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 ZNF629Q9UEG4 869 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 TNRC6AQ8NDV7 1962 aaKnown RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 NBASA2RRP1 2371 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SVILO95425 2214 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 HAX1O00165 279 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SLC35G6P0C7Q6 338 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 YPEL3P61236 119 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 SLC35A1P78382 337 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 IL15RAQ13261 267 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 CST6Q15828 149 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 TMEM236Q5W0B7 351 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 Q6ZTK2 550 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SPACA3Q8IXA5 215 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 ZNF587Q96SQ5 575 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 GPR21Q99679 349 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms