RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LYSMD2Q8IV50 215 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 MMD2Q8IY49 270 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 TSPAN14Q8NG11 270 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 OR9G4Q8NGQ1 327 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 OR13F1Q8NGS4 319 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 SECTM1Q8WVN6 248 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 USMG5Q96IX5 58 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 HSD17B10Q99714 261 aaKnown RBP6.72□□□□□ -1.33
ATG4A-205ENST00000394892 NAA50Q9GZZ1 169 aaKnown RBP6.72□□□□□ -1.33
ATG4A-205ENST00000394892 C19orf73Q9NVV2 129 aa6.72□□□□□ -1.33
ATG4A-205ENST00000394892 PEF1Q9UBV8 284 aaKnown RBP6.72□□□□□ -1.33
ATG4A-205ENST00000394892 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.71□□□□□ -1.34
ATG4A-205ENST00000394892 A0A0G2JLM5 398 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 PPP5D1E7EU14 171 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 SULT1C2O00338 296 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 AIREO43918 545 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR2J3O76001 311 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 SLC22A5O76082 557 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR2A4O95047 310 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 EIF4EP06730 217 aaKnown RBP6.71□□□□□ -1.34
ATG4A-205ENST00000394892 CRYGCP07315 174 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 SMIM18P0DKX4 95 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 IGHV4-30-4P0DP06 118 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 NAT1P18440 290 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 ZP3P21754 424 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 CD40LGP29965 261 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 GNRHRP30968 328 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 RFX2P48378 723 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 TAS2R20P59543 309 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 CBX3Q13185 183 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 EXOSC2Q13868 293 aaKnown RBP6.71□□□□□ -1.34
ATG4A-205ENST00000394892 MSMO1Q15800 293 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 TIMM50Q3ZCQ8 353 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR4A47Q6IF82 309 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 DHRS11Q6UWP2 260 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR5AP2Q8NGF4 316 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR6Q1Q8NGQ2 317 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR4S2Q8NH73 311 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF414Q96IQ9 312 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR2A7Q96R45 310 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 OR4C12Q96R67 309 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 PHB2Q99623 299 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 DCUN1D5Q9BTE7 237 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 SLC5A7Q9GZV3 580 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 SLC2A9Q9NRM0 540 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 PRELID3BQ9Y3B1 194 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 S4R3C0 116 aa6.71□□□□□ -1.34
ATG4A-205ENST00000394892 A0A087WXM4 84 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 IGLC7A0M8Q6 106 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 FAM223BA6NKX1 122 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 NPIPB5A8MRT5 1133 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 S1PR2O95136 353 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 IGHV3-23P01764 117 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 REG1AP05451 166 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 RPA2P15927 270 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 CTRB1P17538 263 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 RPL27AP46776 148 aaKnown RBP6.7□□□□□ -1.34
ATG4A-205ENST00000394892 FXYD4P59646 89 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 OR2B8PP59922 312 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 ARPC4P59998 168 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 ATP5G2Q06055 141 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 POU2AF1Q16633 256 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF585BQ52M93 769 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 CTRB2Q6GPI1 263 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 FAM223AQ8IWN6 122 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SPAG16Q8N0X2 631 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SAMD12Q8N8I0 201 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SLC25A46Q96AG3 418 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SPIN2AQ99865 258 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SPIN2BQ9BPZ2 258 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 TM2D3Q9BRN9 247 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 RSRP1Q9BUV0 290 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 ELOVL1Q9BW60 279 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 FUNDC2Q9BWH2 189 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 FXYD6Q9H0Q3 95 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 DIABLOQ9NR28 239 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SIGLEC8Q9NYZ4 499 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SELENOKQ9Y6D0 94 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
ATG4A-205ENST00000394892 SORL1Q92673 2214 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 IGLV11-55A0A075B6I3 123 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 MFSD2BA6NFX1 497 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 A8MZ25 164 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 UPK2O00526 184 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 MPPED1O15442 326 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATG4A-205ENST00000394892 PGLYRP1O75594 196 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-205ENST00000394892 OR2C1O95371 312 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 PMP2P02689 132 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 HLA-GP17693 338 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 PSMB6P28072 239 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 MFAP2P55001 183 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 VBP1P61758 197 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 RPL8P62917 257 aaKnown RBP6.69□□□□□ -1.34
ATG4A-205ENST00000394892 C15orf32Q32M92 178 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 UBE2NLQ5JXB2 153 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms