RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 LHX4Q969G2 390 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 GGTLC1Q9BX51 225 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 MS4A5Q9H3V2 200 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 TNCP24821 2201 aa12.6□□□□□ -0.39
CPSF7-202ENST00000394888 TRBV20OR9-2A0A075B6H5 130 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 SPCS3P61009 180 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 POU2AF1Q16633 256 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 PARLQ9H300 379 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 TRBV24-1A0A075B6N3 115 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 DPRXA6NFQ7 191 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 TRGC2P03986 189 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 DOK5Q9P104 306 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 FOXA2Q9Y261 457 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-202ENST00000394888 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 PCP4L1A6NKN8 68 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 IGKV1-16P04430 117 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 SOD3P08294 240 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 SMIM6P0DI80 62 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 CD1BP29016 333 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 PNRC1Q12796 327 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-202ENST00000394888 ADIPOQQ15848 244 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 MRGPRG-AS1Q2M3A8 158 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 BSXQ3C1V8 233 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 FRZBQ92765 325 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 RAB1CQ92928 201 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-202ENST00000394888 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
CPSF7-202ENST00000394888 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.39
CPSF7-202ENST00000394888 CT45A6P0DMU7 189 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 CT45A5P0DMU8 189 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 CT45A7P0DMV0 189 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 NBL1P41271 181 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 ZCCHC24Q8N2G6 241 aaKnown RBP12.58□□□□□ -0.4
CPSF7-202ENST00000394888 ELOVL1Q9BW60 279 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 CRYAAP02489 173 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 DMRTC2Q8IXT2 367 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF114Q8NC26 417 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 ARFGEF3Q5TH69 2177 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 IGKV1OR2-108A0A075B7D4 117 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 GYPAP02724 150 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 GNB1P62873 340 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
CPSF7-202ENST00000394888 OR51G1Q8NGK1 321 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 CCL13Q99616 98 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 DERL1Q9BUN8 251 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
CPSF7-202ENST00000394888 TMEM250H0YL14 139 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 EDDM3BP56851 147 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 MZT1Q08AG7 82 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 SLC39A9Q9NUM3 307 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 TCF19Q9Y242 345 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 CGB1A6NKQ9 187 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 CYB5BO43169 146 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 RPS10P46783 165 aaKnown RBP12.57□□□□□ -0.4
CPSF7-202ENST00000394888 ATP5G3P48201 142 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 PRSS8Q16651 343 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 ALKBH2Q6NS38 261 aa12.57□□□□□ -0.4
CPSF7-202ENST00000394888 B2MP61769 119 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 GSN-AS1Q9NRJ2 163 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 PAGE4O60829 102 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 OPRK1P41145 380 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 PRR30Q53SZ7 412 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-202ENST00000394888 C16orf82Q7Z2V1 217 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-202ENST00000394888 E7EUB6 86 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 PYY3Q5JQD4 70 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 NAT8Q9UHE5 227 aa12.56□□□□□ -0.4
CPSF7-202ENST00000394888 RPUSD1Q9UJJ7 312 aaKnown RBP12.56□□□□□ -0.4
CPSF7-202ENST00000394888 LINC00869P0C866 280 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 BMP5P22003 454 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRAMEF5Q5TYX0 476 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF833PQ6ZTB9 187 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 MOB3BQ86TA1 216 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 S100A8P05109 93 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 CDX1P47902 265 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRR20EP86478 221 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRR20CP86479 221 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRR20DP86480 221 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRR20BP86481 221 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 PRR20AP86496 221 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 ABHD17AQ96GS6 310 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 KLK10O43240 276 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 IGHV2-70P01814 119 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 DLX6P56179 175 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 NEUROG1Q92886 237 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms