RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CBLN3Q6UW01 205 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM179BQ7Z7N9 219 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 PRSS22Q9GZN4 317 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 LRP5O75197 1615 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 VN1R4Q7Z5H5 301 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 SLC25A28Q96A46 364 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 SLIRPQ9GZT3 109 aaKnown RBP6.4□□□□□ -1.38
SYNE2-205ENST00000394768 NPIPB13A6NJU9 1138 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF883P0CG24 379 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 CCL4P13236 92 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 PSME4Q14997 1843 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 LINC00470Q9BZP3 86 aa6.4□□□□□ -1.38
SYNE2-205ENST00000394768 LOC102724200A0A096LPH7 203 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-205ENST00000394768 C1QAP02745 245 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 CEACAM1P13688 526 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 RND2P52198 227 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-205ENST00000394768 ARFGEF3Q5TH69 2177 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 TRPM7Q96QT4 1865 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 SLC50A1Q9BRV3 221 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 DPM3Q9P2X0 92 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 SIRT4Q9Y6E7 314 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 Q6ZT83 130 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 LINC01587Q99440 93 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 GVQW1Q8N7I0 195 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.39
SYNE2-205ENST00000394768 CGB1A6NKQ9 187 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 GLRXP35754 106 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 DMRTC1Q5HYR2 192 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 MYEOVQ96EZ4 313 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 C1QTNF4Q9BXJ3 329 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 PSCAO43653 123 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 BGLAPP02818 100 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 PATE4P0C8F1 98 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF880Q6PDB4 577 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 C9orf40Q8IXQ3 194 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 VKORC1L1Q8N0U8 176 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 RNASEH2CQ8TDP1 164 aaKnown RBP6.39□□□□□ -1.39
SYNE2-205ENST00000394768 ITLN1Q8WWA0 313 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 SOCS1O15524 211 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-205ENST00000394768 C7orf71A4D174 169 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 EIF3GO75821 320 aaKnown RBP eCLIP6.39□□□□□ -1.39
SYNE2-205ENST00000394768 LY6EQ16553 131 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 HCP5Q6MZN7 132 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF721Q8TF20 911 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
SYNE2-205ENST00000394768 NEU1Q99519 415 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 C7orf77A4D0Y5 90 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 MOSPD3O75425 235 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 ATP6V0CP27449 155 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 WFIKKN1Q96NZ8 548 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 PLA2G2FQ9BZM2 168 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 LOC285556D6RIA3 1793 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 HMX2A2RU54 273 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 NAPSAO96009 420 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 TNFRSF9Q07011 255 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 LDLRAD2Q5SZI1 272 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 KLF4O43474 513 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 SEC11AP67812 179 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 OR10S1Q8NGN2 331 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 NPCDR1Q9BY65 106 aa6.39□□□□□ -1.39
SYNE2-205ENST00000394768 UPK2O00526 184 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SMAD7O15105 426 aaKnown RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 VENTXO95231 258 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ARL14EPLP0DKL9 152 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF488Q96MN9 340 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 PRADC1Q9BSG0 188 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 CBLN4Q9NTU7 201 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF236Q9UL36 1845 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 A1L4Q6 167 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 LYZL2Q7Z4W2 148 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 PGLYRP4Q96LB8 373 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ASCL2Q99929 193 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 RALGAPA2Q2PPJ7 1873 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 MOSP00540 346 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SSTR5P35346 364 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ALG14Q96F25 216 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 V9GYH0 126 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 NDUFB4O95168 129 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 TAF15Q92804 592 aaKnown RBP eCLIP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SLC25A2Q9BXI2 301 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 TAF1LQ8IZX4 1826 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 A0A1B0GVG6 124 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 C3AR1Q16581 482 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SCARF2Q96GP6 870 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 PRO1933Q9H354 126 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF703Q9H7S9 590 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM50AO95807 157 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 CKS1BP61024 79 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 PRSS41Q7RTY9 318 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms