RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PIGYQ3MUY2 71 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
USP49-203ENST00000394253 HSD52Q0P140 79 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 H0YL77 283 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 SAA1P0DJI8 122 aaPredicted RBP11.62□□□□□ -0.55
USP49-203ENST00000394253 PAX1P15863 534 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 TOMM40O96008 361 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 TBR1Q16650 682 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 LOC390937A0A1W2PQ73 354 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 KIAA1644Q3SXP7 199 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 CCL27Q9Y4X3 112 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 NRAPQ86VF7 1730 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.62□□□□□ -0.55
USP49-203ENST00000394253 EFNB2P52799 333 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 SFXN3Q9BWM7 321 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 F8WEM9 126 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 OGG1O15527 345 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 LAMTOR3Q9UHA4 124 aa11.62□□□□□ -0.55
USP49-203ENST00000394253 hCG_38984A0A1B0GV85 526 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 DCAF10Q5QP82 559 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
USP49-203ENST00000394253 ZNF818PQ6ZRF7 136 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 CDIPTO14735 213 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 LEPP41159 167 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
USP49-203ENST00000394253 ZNF479Q96JC4 524 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 EPDR1Q9UM22 224 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 KLF12Q9Y4X4 402 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 ITGB1BP1O14713 200 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 KLKB1P03952 638 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 TMEM42Q69YG0 159 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 DUX5Q96PT3 197 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 CCL26Q9Y258 94 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 SF3B5Q9BWJ5 86 aaKnown RBP11.61□□□□□ -0.55
USP49-203ENST00000394253 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 PNLIPP16233 465 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 NKG7Q16617 165 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 JPT2Q9H910 190 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 LILRA3Q8N6C8 439 aaPredicted RBP11.61□□□□□ -0.55
USP49-203ENST00000394253 SSC4DQ8WTU2 575 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 COQ2Q96H96 371 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 MS4A5Q9H3V2 200 aa11.61□□□□□ -0.55
USP49-203ENST00000394253 MRM2Q9UI43 246 aaKnown RBP11.61□□□□□ -0.55
USP49-203ENST00000394253 ZNF793Q6ZN11 406 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 DTX2Q86UW9 622 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
USP49-203ENST00000394253 RBM38Q9H0Z9 239 aaKnown RBP11.6□□□□□ -0.55
USP49-203ENST00000394253 PDLIM7Q9NR12 457 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 RUNX1Q01196 453 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 MARCH11A6NNE9 402 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 LMO7DNF2Z398 122 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 CIARTQ8N365 385 aaPredicted RBP11.6□□□□□ -0.55
USP49-203ENST00000394253 ZNF660Q6AZW8 331 aaPredicted RBP11.6□□□□□ -0.55
USP49-203ENST00000394253 EXPH5Q8NEV8 1989 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 DDX60LQ5H9U9 1706 aaKnown RBP11.6□□□□□ -0.55
USP49-203ENST00000394253 SHISA7A6NL88 538 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 TRAV9-2A0A087WT02 112 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 NDUFC2O95298 119 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 SPINT1O43278 529 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 CXCL2P19875 107 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 WDR82Q6UXN9 313 aa11.6□□□□□ -0.55
USP49-203ENST00000394253 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 CRYBB3P26998 211 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 TMEM30BQ3MIR4 351 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP49-203ENST00000394253 SHISA5Q8N114 240 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 VKORC1Q9BQB6 163 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 GTSF1LQ9H1H1 148 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 J3QT63 122 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 CLDN14O95500 239 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 RND3P61587 244 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 POU2AF1Q16633 256 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 ANKRD34AQ69YU3 496 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 MARS2Q96GW9 593 aaKnown RBP11.59□□□□□ -0.55
USP49-203ENST00000394253 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 SNAI2O43623 268 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 WDYHV1Q96HA8 205 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 TECTAO75443 2155 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 FAM90A27PA6NNH2 459 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 IFNL4K9M1U5 179 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 M0R381 172 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 CCL2P13500 99 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 ATP5G2Q06055 141 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 SIPA1L3O60292 1781 aaPredicted RBP11.59□□□□□ -0.55
USP49-203ENST00000394253 A0A0G2JLM5 398 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms