RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 RPL19P84098 196 aaKnown RBP9.33□□□□□ -0.92
CUX1-204ENST00000393824 TLE1Q04724 770 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 ZNF324BQ6AW86 544 aaPredicted RBP9.33□□□□□ -0.92
CUX1-204ENST00000393824 FAM180AQ6UWF9 173 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 C1orf174Q8IYL3 243 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 Q8N976 141 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 CPT1CQ8TCG5 803 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 SLC25A22Q9H936 323 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 CACNG5Q9UF02 275 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 LRP5LA4QPB2 252 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 PDE6DO43924 150 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 FOXG1P55316 489 aaPredicted RBP9.33□□□□□ -0.92
CUX1-204ENST00000393824 PCBD1P61457 104 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 TCF23Q7RTU1 214 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 CLUHP3Q96NS8 147 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 PRDM14Q9GZV8 571 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 PRR14LQ5THK1 2151 aa9.33□□□□□ -0.92
CUX1-204ENST00000393824 IGKV1-6A0A0C4DH72 117 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 CD300LBA8K4G0 201 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 C11orf94C9JXX5 98 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 F6UZH7 168 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
CUX1-204ENST00000393824 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 PSG2P11465 335 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 MORN2Q502X0 79 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 OR10V1Q8NGI7 309 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 SPSB4Q96A44 273 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 GMPPAQ96IJ6 420 aaPredicted RBP9.32□□□□□ -0.92
CUX1-204ENST00000393824 TMEM38BQ9NVV0 291 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 ATP23Q9Y6H3 246 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 IGKV1-39P01597 117 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 IGKV1D-39P04432 117 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 APOBEC3AP31941 199 aaPredicted RBP9.32□□□□□ -0.92
CUX1-204ENST00000393824 PLCXD3Q63HM9 321 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 SEM1Q6ZVN7 128 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 SFRP2Q96HF1 295 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 PPIAL4AQ9Y536 164 aa9.32□□□□□ -0.92
CUX1-204ENST00000393824 TRBV6-6A0A0A6YYG2 114 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 SMPD2O60906 423 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 HYPMO75409 117 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 GPX1P07203 203 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 COX5AP20674 150 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 UBE2G2P60604 165 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 GNB1P62873 340 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
CUX1-204ENST00000393824 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 TMEM95Q3KNT9 176 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 SPATA45Q537H7 98 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 SPANXN5Q5MJ07 72 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 ZNF709Q8N972 641 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 CLCF1Q9UBD9 225 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 INTS1Q8N201 2190 aaKnown RBP9.31□□□□□ -0.92
CUX1-204ENST00000393824 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 FAM90A26D6RGX4 464 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 M0QZ24 198 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 FGF12P61328 243 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 ZNF611Q8N823 705 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 C9orf106Q8NAJ2 232 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 TRIB1Q96RU8 372 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 SAMD10Q9BYL1 202 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 HSPB7Q9UBY9 170 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 OR2W1Q9Y3N9 320 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
CUX1-204ENST00000393824 RBFOX2O43251 390 aaKnown RBP eCLIP9.3□□□□□ -0.926e-7■■■□□ 18.3
CUX1-204ENST00000393824 IGKV1-5P01602 117 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 ZNF32P17041 273 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 CDC34P49427 236 aaPredicted RBP9.3□□□□□ -0.92
CUX1-204ENST00000393824 FOXF2Q12947 444 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 MRPL49Q13405 166 aaKnown RBP9.3□□□□□ -0.92
CUX1-204ENST00000393824 LINC00596Q86U02 117 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 BAGE3Q86Y29 109 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 SIGLECL1Q8N7X8 197 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 PIGCQ92535 297 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
CUX1-204ENST00000393824 C12orf49Q9H741 205 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 ZNF430Q9H8G1 570 aaPredicted RBP9.3□□□□□ -0.92
CUX1-204ENST00000393824 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
CUX1-204ENST00000393824 FAM215AQ9Y5M1 114 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 CHD6Q8TD26 2715 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 IGKV3D-15A0A087WSY6 115 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 DEGS1O15121 323 aa9.3□□□□□ -0.92
CUX1-204ENST00000393824 KITLGP21583 273 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms