RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 OR51A2Q8NGJ7 313 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 OR10G9Q8NGN4 311 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 FBLIM1Q8WUP2 373 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 SLC38A5Q8WUX1 472 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 ADTRPQ96IZ2 230 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 FEVQ99581 238 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 FLVCR1Q9Y5Y0 555 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TRGV10A0A0A0MS01 117 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 COLCA2A8K830 154 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 DEFB108AA8MXU0 73 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF670-ZNF695F2Z2N8 137 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 CHST1O43916 411 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 CNRIP1Q96F85 164 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 IGLV3-32A0A0A0MS00 114 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 TRAV40A0A0B4J280 105 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 TEX50A0A1B0GTY4 177 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1B0GU03 582 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 E7EQL1 145 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 HLA-DRB5Q30154 266 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 OR4C3Q8NH37 302 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SECTM1Q8WVN6 248 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 TMEM191AQ9H0A3 160 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 PARLQ9H300 379 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SERTAD4Q9NUC0 356 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1W2PRD5 423 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 TCRBV7S2A1N4TA0A589 114 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 CDHR4A6H8M9 788 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 GSTZ1O43708 216 aaPredicted RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 MGST1P10620 155 aaKnown RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 HIST1H1DP16402 221 aaKnown RBP6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SDC1P18827 310 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 IGHV1-2P23083 117 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 IER3P46695 156 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 ERVS71-1P61550 626 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 OR2T5Q6IEZ7 315 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF429Q86V71 674 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 IGDCC3Q8IVU1 814 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 OR5AS1Q8N127 324 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SYS1Q8N2H4 156 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 C5orf17Q8NAS9 161 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 OR2T29Q8NH02 315 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 PTX4Q96A99 478 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 C4orf45Q96LM5 186 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SYNPO2LQ9H987 977 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 SLC25A15Q9Y619 301 aa6.84□□□□□ -1.31
LIMS1-203ENST00000393310 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 OR5B21A6NL26 309 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 HPXP02790 462 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 CECR9P0C854 216 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 SLC6A1P30531 599 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 NTF4P34130 210 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 IL17RELQ6ZVW7 336 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 OR4K13Q8NH42 304 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 DUSP21Q9H596 190 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 KLK5Q9Y337 293 aaPredicted RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 TSC2P49815 1807 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 IGHV2OR16-5A0A0B4J2B6 119 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 CPSF4LA6NMK7 179 aaKnown RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 IFITM5A6NNB3 132 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 HBZP02008 142 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 IL6RP08887 468 aaPredicted RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 DLX6P56179 175 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 MSMO1Q15800 293 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 SLC18B1Q6NT16 456 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 BTNL8Q6UX41 500 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ATG4DQ86TL0 474 aaPredicted RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 Q8IYB0 196 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 C20orf196Q8IYI0 205 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF502Q8TBZ5 544 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 FLYWCH2Q96CP2 140 aaKnown RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 A0A1W2PP11 408 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ZIC3O60481 467 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 PGA4P0DJD7 388 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 PGA5P0DJD9 388 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 IGFBP2P18065 325 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ELK1P19419 428 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 CRYBB2P43320 205 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 CEACAM19Q7Z692 300 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ZDHHC23Q8IYP9 409 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ABHD14AQ9BUJ0 271 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 GATA5Q9BWX5 397 aaPredicted RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 PPP1R3EQ9H7J1 279 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 MPDZO75970 2070 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 OTPQ5XKR4 325 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF880Q6PDB4 577 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 GTSCR1Q86UQ5 136 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms