RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NHLRC2Q8NBF2 726 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 MS4A10Q96PG2 267 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 DNAJC4Q9NNZ3 241 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 FAM74A7A6NL05 159 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 ID1P41134 155 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 IQCJQ1A5X6 159 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 DYNLRB2Q8TF09 96 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 TMEM56-RWDD3S4R434 201 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 ELOA3CA0A087WX78 387 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-202ENST00000392770 IGHV3-48P01763 117 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 METTL26Q96S19 204 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 CDKN1AP38936 164 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 HLA-DRB5Q30154 266 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 STPG3Q8N7X2 389 aa13.92□□□□□ -0.18
SCN3B-202ENST00000392770 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 RTN4RL2Q86UN3 420 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 OSR1Q8TAX0 266 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 NPIPB11E5RHQ5 1161 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 FCGR2BP31994 310 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 COMPP49747 757 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 A1L4Q6 167 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 IGHV1-46P01743 117 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 TMSB15BA0A087X1C1 80 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 SAA2-SAA4A0A096LPE2 208 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 SAA2P0DJI9 122 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 MPZP25189 248 aa13.91□□□□□ -0.18
SCN3B-202ENST00000392770 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 YTHDF2Q9Y5A9 579 aaKnown RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 MDC1Q14676 2089 aaKnown RBP13.91□□□□□ -0.18
SCN3B-202ENST00000392770 BMPR1BO00238 502 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 CSN3P07498 182 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 CCL3L1P16619 93 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 COX19Q49B96 90 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 CBLN4Q9NTU7 201 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 TRAV30A0A087WSZ9 112 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 APCSP02743 223 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 ZNF324BQ6AW86 544 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-202ENST00000392770 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 RPL30P62888 115 aaKnown RBP13.9□□□□□ -0.18
SCN3B-202ENST00000392770 SLC35B1P78383 322 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 KLHDC1Q8N7A1 406 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 NPIPB3Q92617 1050 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 RNF222A6NCQ9 220 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 SNURFLB1AK76 121 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 FCER1GP30273 86 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 ZNF137PP52743 207 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 ATP5G2Q06055 141 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 OR2D3Q8NGH3 330 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 RSPO3Q9BXY4 272 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-202ENST00000392770 SCN8AQ9UQD0 1980 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 M0R2Z0 102 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 PQLC2Q6ZP29 291 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 RBPMS2Q6ZRY4 209 aaKnown RBP13.9□□□□□ -0.18
SCN3B-202ENST00000392770 SPSB4Q96A44 273 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 PSMG3Q9BT73 122 aaPredicted RBP13.9□□□□□ -0.18
SCN3B-202ENST00000392770 NPCDR1Q9BY65 106 aa13.9□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1D-33P01593 117 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 IGKV1-33P01594 117 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 NABP2Q9BQ15 211 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 PGPA6NDG6 321 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 YPEL1O60688 119 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 C8orf88P0DMB2 117 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 TFF3Q07654 80 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 PLA2G2CQ5R387 149 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 DNM1P46Q6ZS02 220 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 RNF144BQ7Z419 303 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 YPEL2Q96QA6 119 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 OR51M1Q9H341 326 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 MORN2Q502X0 79 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 FOXL2NBQ6ZUU3 175 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 TXNDC17Q9BRA2 123 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 ZNF253O75346 499 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 GTF3AQ92664 365 aaKnown RBP13.89□□□□□ -0.19
SCN3B-202ENST00000392770 VPS25Q9BRG1 176 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 FBXL15Q9H469 300 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 SLC25A15Q9Y619 301 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 MOSP00540 346 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 IGHG3P01860 377 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 DPM3Q9P2X0 92 aa13.89□□□□□ -0.19
SCN3B-202ENST00000392770 IL6RP08887 468 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-202ENST00000392770 HTN1P15515 57 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 PAFAH1B2P68402 229 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-202ENST00000392770 RNFT1Q5M7Z0 435 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 LY6G6FQ5SQ64 297 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 BPIFA4PQ86YQ2 179 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 C16orf92Q96LL3 132 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 WISP1O95388 367 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 ISLRO14498 428 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 LRRC75BQ2VPJ9 315 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 Q9UFV3 132 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 ACAA1P09110 424 aaPredicted RBP13.88□□□□□ -0.19
SCN3B-202ENST00000392770 SGMS2Q8NHU3 365 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 FAM168AQ92567 244 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 WFIKKN1Q96NZ8 548 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 PITPNC1Q9UKF7 332 aa13.88□□□□□ -0.19
SCN3B-202ENST00000392770 LYNX1G3V0Z9 82 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms