RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ZNF826PQ6ZT77 177 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 PCM1Q15154 2024 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM229AB2RXF0 380 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM50AO95807 157 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 RNASE7Q9H1E1 156 aaKnown RBP13.8□□□□□ -0.2
SHANK1-204ENST00000391814 TRAV9-2A0A087WT02 112 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 AMBPP02760 352 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 CXCL10P02778 98 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 SELENOTP62341 195 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 SIPA1L3O60292 1781 aaPredicted RBP13.79□□□□□ -0.2
SHANK1-204ENST00000391814 SRFP11831 508 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 PEAR1Q5VY43 1037 aaPredicted RBP13.79□□□□□ -0.2
SHANK1-204ENST00000391814 RAB1CQ92928 201 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 DNAL4O96015 105 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 C9orf50Q5SZB4 431 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 GATAD1Q8WUU5 269 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 SCN8AQ9UQD0 1980 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 MOSP00540 346 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 C1QTNF9P0C862 333 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 TIMM23BQ5SRD1 257 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 OR51G1Q8NGK1 321 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
SHANK1-204ENST00000391814 METTL26Q96S19 204 aa13.79□□□□□ -0.2
SHANK1-204ENST00000391814 SMCHD1A6NHR9 2005 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 ADRA2AP08913 450 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 C4orf51C9J302 202 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
SHANK1-204ENST00000391814 LEPP41159 167 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 RPP21Q9H633 154 aaKnown RBP13.78□□□□□ -0.2
SHANK1-204ENST00000391814 WFDC1Q9HC57 220 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 F8VVB4 439 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 F8VWA3 439 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 C19orf48Q6RUI8 117 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 PCSK4Q6UW60 755 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 TRAV9-1A0A075B6T8 112 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 FOXS1O43638 330 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
SHANK1-204ENST00000391814 ORAOV1Q8WV07 137 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 C18orf12Q96KH6 178 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 SCN3AQ9NY46 2000 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 LINC01590Q5TEZ4 76 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 FAM74A4Q5TZK3 123 aa13.78□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A20PA6NIJ5 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A8PA6NJQ4 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A22PA8MWA6 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A12PA8MX19 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A5PA8MXJ8 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A23PA8MXZ1 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 NPIPB6E9PJ23 425 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 TNFSF13O75888 250 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A15PP0C7V4 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A13PP0C7W8 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A14PP0C7W9 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FAM90A24PP0C7X0 464 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 LY6G6FQ5SQ64 297 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 PGPEP1Q9NXJ5 209 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FOXD3Q9UJU5 478 aaPredicted RBP13.77□□□□□ -0.2
SHANK1-204ENST00000391814 SS18L1O75177 396 aaPredicted RBP13.77□□□□□ -0.2
SHANK1-204ENST00000391814 CD3EP07766 207 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 HSPE1P61604 102 aaKnown RBP13.77□□□□□ -0.2
SHANK1-204ENST00000391814 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 SCN9AQ15858 1988 aa13.77□□□□□ -0.2
SHANK1-204ENST00000391814 FGF16O43320 207 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 CEACAM1P13688 526 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 A0A1B0GTI1 187 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 ZNF815PA8K554 130 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 SRSF4Q08170 494 aaKnown RBP13.77□□□□□ -0.21
SHANK1-204ENST00000391814 ZNF56Q15929 161 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 SAMD5Q5TGI4 173 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 CALYQ9NYX4 217 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 IGKV1D-42A0A075B6H8 117 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 IGFBP2P18065 325 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 TRA2AQ13595 282 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHANK1-204ENST00000391814 OR10J3Q5JRS4 329 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 NAA38Q9BRA0 125 aaKnown RBP13.77□□□□□ -0.21
SHANK1-204ENST00000391814 SELENOKQ9Y6D0 94 aa13.77□□□□□ -0.21
SHANK1-204ENST00000391814 ZNF146Q15072 292 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 TPTE2P1Q5T6R2 138 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 NR2C2APQ86WQ0 139 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 SCGB3A1Q96QR1 104 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 TCF19Q9Y242 345 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 PEX7O00628 323 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 C1QL2Q7Z5L3 287 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 IDI2-AS1Q9NZ38 188 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
SHANK1-204ENST00000391814 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 MIR17HGQ75NE6 70 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 C19orf24Q9BVV8 132 aa13.76□□□□□ -0.21
SHANK1-204ENST00000391814 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
SHANK1-204ENST00000391814 THY1P04216 161 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms