RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DLX6P56179 175 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB4BP61018 213 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 RPL30P62888 115 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CIRBPQ14011 172 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 EBPQ15125 230 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OR4D1Q15615 310 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 C10orf67Q8IYJ2 551 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 EXOC3-AS1Q8N2X6 119 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OR1M1Q8NGA1 313 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OR52E4Q8NGH9 312 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OR4D11Q8NGI4 311 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OR2Y1Q8NGV0 311 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 LRRC20Q8TCA0 184 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF418Q8TF45 676 aaPredicted RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB2BQ8WUD1 216 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 C4orf3Q8WVX3 66 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CCDC124Q96CT7 223 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 OPTNQ96CV9 577 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM56Q96MV1 263 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 ERMAPQ96PL5 475 aaPredicted RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 RASL12Q9NYN1 266 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 MAT2BQ9NZL9 334 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 RSL24D1Q9UHA3 163 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CLEC2DQ9UHP7 191 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 HDGFL3Q9Y3E1 203 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 DICER1Q9UPY3 1922 aaKnown RBP-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 KIAA0232Q92628 1395 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TTC21AQ8NDW8 1320 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 DMBT1Q9UGM3 2413 aaPredicted RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 OR2T8A6NH00 312 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 SULT1C2O00338 296 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TNFAIP8O95379 198 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 OTCP00480 354 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 ASS1P00966 412 aaKnown RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TPM2P07951 284 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 ASAH2BP0C7U1 165 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 LIMS3P0CW19 117 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 LIMS4P0CW20 117 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 CASQ1P31415 396 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 CD151P48509 253 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 EIF2B2P49770 351 aaKnown RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB13P51153 203 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 PSMD7P51665 324 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 POLR2GP62487 172 aaKnown RBP eCLIP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TNNC1P63316 161 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 FABP5Q01469 135 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 STX5Q13190 355 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF846Q147U1 533 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 MESTQ5EB52 335 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 SPANXN5Q5MJ07 72 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 SPINK6Q6UWN8 80 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 ST13P4Q8IZP2 240 aaPredicted RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 PACRGLQ8N7B6 248 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 CDRT4Q8N9R6 151 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 C11orf40Q8WZ69 217 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM109Q9BVC6 243 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 NSRP1Q9H0G5 558 aaKnown RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 HES4Q9HCC6 221 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 FKBP14Q9NWM8 211 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 NXT1Q9UKK6 140 aaKnown RBP-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TIMM22Q9Y584 194 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 TNCP24821 2201 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 WDR90Q96KV7 1748 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 ABCC12Q96J65 1359 aa-0.08□□□□□ -2.42
SNORD28B-201ENST00000390993 REREQ9P2R6 1566 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 TEX50A0A1B0GTY4 177 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 C19orf84I3L1E1 186 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 KCNK1O00180 336 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 INE1O15225 51 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 LEPROTO15243 131 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 ACOX3O15254 700 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 SYNGR1O43759 233 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 FADS1O60427 444 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 OR1I1O60431 355 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 HMMRO75330 724 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 YEATS4O95619 227 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 FADS2O95864 444 aaKnown RBP-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 CST4P01036 141 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 C1QAP02745 245 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 HIST1H1CP16403 213 aaKnown RBP-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 S100A7P31151 101 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 FXYD6P3P58550 94 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 MPV17LQ2QL34 196 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 C18orf21Q32NC0 220 aaPredicted RBP-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 DNAL1Q4LDG9 190 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 RBM48Q5RL73 367 aaKnown RBP-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 Q6ZS92 163 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 GPHB5Q86YW7 130 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 LINC00311Q8N616 119 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 OR11H6Q8NGC7 330 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 STOML3Q8TAV4 291 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 DYNC2LI1Q8TCX1 351 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 ANKRD7Q92527 254 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 RORBQ92753 470 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 RNASE6Q93091 150 aaKnown RBP-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM106AQ96A25 262 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 ANKRD36BP1Q96IX9 119 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 CCL13Q99616 98 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms