RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MKRN2OSH3BPM6 223 aa12.08□□□□□ -0.48
RTF1-201ENST00000389629 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
RTF1-201ENST00000389629 GCHFRP30047 84 aa12.08□□□□□ -0.48
RTF1-201ENST00000389629 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
RTF1-201ENST00000389629 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
RTF1-201ENST00000389629 TIMM9Q9Y5J7 89 aa12.08□□□□□ -0.48
RTF1-201ENST00000389629 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 LPAR2Q9HBW0 351 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 COX5BP10606 129 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 COX6A1P12074 109 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 MUC15Q8N387 334 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
RTF1-201ENST00000389629 A6NDN8 102 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 ARL16Q0P5N6 197 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 DIRC2Q96SL1 478 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 J3QR06 171 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 SCGB2A1O75556 95 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 CLDN14O95500 239 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 CGAP01215 116 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 OCC1Q8TAD7 63 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 NABP1Q96AH0 204 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 MAS1LP35410 378 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 CSN1S1P47710 185 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 RELBQ01201 579 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 TDHQ8IZJ6 230 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
RTF1-201ENST00000389629 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 FGFBP3Q8TAT2 258 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 LIME1Q9H400 295 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
RTF1-201ENST00000389629 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 APELAP0DMC3 54 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
RTF1-201ENST00000389629 M0R1B8 84 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 CA2P00918 260 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 NMUP48645 174 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
RTF1-201ENST00000389629 ZNF355PQ9NSJ1 428 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 NKX6-3A6NJ46 265 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 PATE3B3GLJ2 98 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 GPR6P46095 362 aaPredicted RBP12.05□□□□□ -0.48
RTF1-201ENST00000389629 RND2P52198 227 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 DHRS13Q6UX07 377 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 ASCL3Q9NQ33 180 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 ANAPC10Q9UM13 185 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 A0A0G2JMM0 328 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 A0A1W2PPB8 328 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 A0A1W2PRS3 328 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 KIR3DP1A8MWS1 328 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 CXXC4Q9H2H0 198 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 HSPB8Q9UJY1 196 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 AGFG2O95081 481 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 IGLV3-19P01714 112 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
RTF1-201ENST00000389629 PLP1P60201 277 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 STPG3Q8N7X2 389 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 TMEM45BQ96B21 275 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 DEPPQ9NTK1 212 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 DOCK7Q96N67 2140 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 ZDBF2Q9HCK1 2354 aa12.05□□□□□ -0.48
RTF1-201ENST00000389629 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
RTF1-201ENST00000389629 OR2J3O76001 311 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 RBP4P02753 201 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 LINC00614P0C842 121 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 CRYGSP22914 178 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 ACTL10Q5JWF8 245 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 ZNF324BQ6AW86 544 aaPredicted RBP12.04□□□□□ -0.48
RTF1-201ENST00000389629 RND1Q92730 232 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 IGLV3-12A0A075B6K2 115 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 IGHV3OR15-7A0A075B7D8 119 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 IGHV3-21A0A0B4J1V1 117 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 TMEM50AO95807 157 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 MT-CO3P00414 261 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
RTF1-201ENST00000389629 IL15RAQ13261 267 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 ZFP30Q9Y2G7 519 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 PRSS1P07477 247 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 GZMHP20718 246 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 SSTR5P35346 364 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 NIT1Q86X76 327 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 OR5P3Q8WZ94 311 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 PAXXQ9BUH6 204 aa12.04□□□□□ -0.48
RTF1-201ENST00000389629 IGLV3-32A0A0A0MS00 114 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 A0A0G2JRQ6 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms