RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 IGKV3D-15A0A087WSY6 115 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 C19orf24Q9BVV8 132 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 WASHC3Q9Y3C0 194 aa13.62□□□□□ -0.23
PTPRN2-201ENST00000389413 IGHV3-21A0A0B4J1V1 117 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 CRYBB3P26998 211 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 OTX1P32242 354 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 FDCSPQ8NFU4 85 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 VPS25Q9BRG1 176 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 DNAJC4Q9NNZ3 241 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 SNRPCP09234 159 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 LCN2P80188 198 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 ZNF324BQ6AW86 544 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 WDR31Q8NA23 367 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 A8MWL6 223 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 CELA3BP08861 270 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 VWA1Q6PCB0 445 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 WDYHV1Q96HA8 205 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 HIGD1AQ9Y241 93 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 RPLP1P05386 114 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 LYL1P12980 280 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 IGHV1-2P23083 117 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 ZNF497Q6ZNH5 498 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 DNM1P46Q6ZS02 220 aa13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 C1orf162Q8NEQ5 155 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-201ENST00000389413 OR4A8P0C604 315 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 ZNF25P17030 456 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 S100A4P26447 101 aaKnown RBP13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 PTTG1IPP53801 180 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 MMDQ15546 238 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 NCOR1O75376 2440 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 GLRXP35754 106 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 MMD2Q8IY49 270 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 FAM222BQ8WU58 562 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 MAP1LC3CQ9BXW4 147 aa13.6□□□□□ -0.23
PTPRN2-201ENST00000389413 FOLR2P14207 255 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 LBHQ53QV2 105 aaPredicted RBP13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 TMEM42Q69YG0 159 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 ZNF524Q96C55 264 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 IL6RP08887 468 aaPredicted RBP13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 DOCK9Q9BZ29 2069 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 CORTO00230 105 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 CA2P00918 260 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 RND2P52198 227 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 RTP5Q14D33 572 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 HCP5Q6MZN7 132 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 IGHV3-72A0A0B4J1Y9 119 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 C9orf172C9J069 976 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 PLAUP00749 431 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 TNFSF10P50591 281 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 PCSK4Q6UW60 755 aa13.59□□□□□ -0.23
PTPRN2-201ENST00000389413 APC2O95996 2303 aa13.58□□□□□ -0.23
PTPRN2-201ENST00000389413 DCTN5Q9BTE1 182 aa13.58□□□□□ -0.23
PTPRN2-201ENST00000389413 TNFRSF19Q9NS68 423 aa13.58□□□□□ -0.23
PTPRN2-201ENST00000389413 UBE2CO00762 179 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 ZNF137PP52743 207 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 NUBP1P53384 320 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 ZNF596Q8TC21 504 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 ICE1Q9Y2F5 2266 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 PGPA6NDG6 321 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 NAPSAO96009 420 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 FXYD3Q14802 87 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 TIMM23BQ5SRD1 257 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 FOXL2NBQ6ZUU3 175 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 SLC25A17O43808 307 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 WISP1O95388 367 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 FAM87AP0C7U9 286 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 FOXG1P55316 489 aaPredicted RBP13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 C1RLQ9NZP8 487 aa13.58□□□□□ -0.24
PTPRN2-201ENST00000389413 EP300Q09472 2414 aaPredicted RBP13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 TANC1Q9C0D5 1861 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 IGHV2OR16-5A0A0B4J2B6 119 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 GRIFINA4D1Z8 144 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 ETV2O00321 342 aaPredicted RBP13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 HEPN1Q6WQI6 88 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 C11orf42Q8N5U0 333 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 MBD3L1Q8WWY6 194 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 COA4Q9NYJ1 87 aa13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-201ENST00000389413 TRBV9A0A0B4J1U6 114 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 GBGT1Q8N5D6 347 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 WFIKKN1Q96NZ8 548 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 A0A1B0GW64 132 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 NMSQ5H8A3 153 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 PRNTQ86SH4 94 aa13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 MRPL32Q9BYC8 188 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-201ENST00000389413 PLXNB3Q9ULL4 1909 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms