RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 S100A8P05109 93 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 GAMTQ14353 236 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF474Q6S9Z5 364 aaPredicted RBP10.28□□□□□ -0.76
GABPB1-203ENST00000380877 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
GABPB1-203ENST00000380877 SHANK1Q9Y566 2161 aa10.27□□□□□ -0.76
GABPB1-203ENST00000380877 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.76
GABPB1-203ENST00000380877 OR1L6Q8NGR2 347 aa10.27□□□□□ -0.76
GABPB1-203ENST00000380877 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.76
GABPB1-203ENST00000380877 WDR61Q9GZS3 305 aaKnown RBP10.27□□□□□ -0.76
GABPB1-203ENST00000380877 UTRNP46939 3433 aa10.27□□□□□ -0.76
GABPB1-203ENST00000380877 DOPEY2Q9Y3R5 2298 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 F12P00748 615 aaPredicted RBP10.27□□□□□ -0.77
GABPB1-203ENST00000380877 SCGB2A2Q13296 93 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 SUMO1P63165 101 aaKnown RBP10.27□□□□□ -0.77
GABPB1-203ENST00000380877 WFIKKN1Q96NZ8 548 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 S100A4P26447 101 aaKnown RBP10.27□□□□□ -0.77
GABPB1-203ENST00000380877 FHITP49789 147 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 RAB24Q969Q5 203 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 CCL19Q99731 98 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 TRAPPC1Q9Y5R8 145 aa10.27□□□□□ -0.77
GABPB1-203ENST00000380877 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 PSPNO60542 156 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 YPEL1O60688 119 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 SNRPCP09234 159 aaKnown RBP10.26□□□□□ -0.77
GABPB1-203ENST00000380877 DANCRP0C864 163 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 BATFQ16520 125 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 DNM1P46Q6ZS02 220 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 DPF1Q92782 380 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 YPEL2Q96QA6 119 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 NAT8BQ9UHF3 227 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 B4DEV8 164 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 K7ENP7 123 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
GABPB1-203ENST00000380877 CDKN1AP38936 164 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 RTN4RL2Q86UN3 420 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 PAXXQ9BUH6 204 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF430Q9H8G1 570 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-203ENST00000380877 DPM3Q9P2X0 92 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 A1L4Q6 167 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 HELTA6NFD8 242 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 H0Y8G0 127 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-203ENST00000380877 AARDQ4LEZ3 155 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF788Q6ZQV5 615 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 WDR31Q8NA23 367 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-203ENST00000380877 NAPSAO96009 420 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 IGKV3-15P01624 115 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 REG1AP05451 166 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 IGFL3Q6UXB1 125 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 UNQ6494/PRO21346Q6UXR6 183 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 COLCA1Q6ZS62 124 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 TMEM204Q9BSN7 226 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
GABPB1-203ENST00000380877 RANP62826 216 aaKnown RBP10.25□□□□□ -0.77
GABPB1-203ENST00000380877 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 MORN2Q502X0 79 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 AURKAIP1Q9NWT8 199 aaPredicted RBP10.25□□□□□ -0.77
GABPB1-203ENST00000380877 PLAUP00749 431 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 SELLP14151 372 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 COMPP49747 757 aaPredicted RBP10.25□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF324BQ6AW86 544 aaPredicted RBP10.25□□□□□ -0.77
GABPB1-203ENST00000380877 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 SSX7Q7RTT5 188 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 TMEM18Q96B42 140 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 CBLN4Q9NTU7 201 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 GAR1Q9NY12 217 aaKnown RBP10.25□□□□□ -0.77
GABPB1-203ENST00000380877 MFSD2BA6NFX1 497 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 SIGLEC5O15389 551 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 NTF4P34130 210 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 C16orf82Q7Z2V1 217 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 CHODLQ9H9P2 273 aa10.25□□□□□ -0.77
GABPB1-203ENST00000380877 PQLC2Q6ZP29 291 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 P2RX4Q99571 388 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
GABPB1-203ENST00000380877 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 PPOXP50336 477 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 LCN2P80188 198 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 SLC16A13Q7RTY0 426 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 WDFY1Q8IWB7 410 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 H0YIZ8 118 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 SIGLECL1Q8N7X8 197 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 OR5AU1Q8NGC0 362 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 RPRMQ9NS64 109 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF586Q9NXT0 402 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 CENPFP49454 3210 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 FCN1O00602 326 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 CA2P00918 260 aa10.24□□□□□ -0.77
GABPB1-203ENST00000380877 HSPB1P04792 205 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms