RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ST6GALNAC6Q969X2 333 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 GALMQ96C23 342 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 ZNF705GA8MUZ8 300 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-201ENST00000379433 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 TMEM222Q9H0R3 208 aa9.03□□□□□ -0.96
NEDD9-201ENST00000379433 DEDDO75618 318 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 IGHV2-5P01817 119 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 PRDX2P32119 198 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 TIMP3P35625 211 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 PLA2G5P39877 138 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 ECI1P42126 302 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 UTF1Q5T230 341 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 CD177Q8N6Q3 437 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 SLC25A32Q9H2D1 315 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 UFC1Q9Y3C8 167 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 ITPR1Q14643 2758 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 CHST1O43916 411 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 GYPAP02724 150 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 LGALS7P47929 136 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 TFPI2P48307 235 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 BSPH1Q075Z2 132 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 LY6DQ14210 128 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 RNASEKQ6P5S7 137 aaKnown RBP9.02□□□□□ -0.97
NEDD9-201ENST00000379433 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 C16orf97H3BN30 126 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 F2RP25116 425 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 GRNP28799 593 aaKnown RBP9.02□□□□□ -0.97
NEDD9-201ENST00000379433 G6PCP35575 357 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 SEC61GP60059 68 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 TNFAIP6P98066 277 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-201ENST00000379433 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
NEDD9-201ENST00000379433 RUNX1Q01196 453 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 TIMM23BQ5SRD1 257 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 KCNIP4Q6PIL6 250 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 COQ2Q96H96 371 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 CCL13Q99616 98 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 ZNRD1Q9P1U0 126 aa9.02□□□□□ -0.97
NEDD9-201ENST00000379433 TMEM30CPA0ZSE6 113 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 RAB7AP51149 207 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 TESK1Q15569 626 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 ZNF324BQ6AW86 544 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-201ENST00000379433 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CYTL1Q9NRR1 136 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 ENSAO43768 121 aaKnown RBP9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CD40P25942 277 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CHRNB4P30926 498 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CCKARP32238 428 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CFHR2P36980 270 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-201ENST00000379433 ZNF345Q14585 488 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 Q6ZRM9 215 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 Q8IYB0 196 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 DRAM1Q8N682 238 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 OR5D13Q8NGL4 314 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 OR4A4PQ8NGN8 299 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 LPAR3Q9UBY5 353 aa9.01□□□□□ -0.97
NEDD9-201ENST00000379433 TRBV6-7A0A0A0MS04 114 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 KIAA1324LA8MWY0 1029 aaPredicted RBP9□□□□□ -0.97
NEDD9-201ENST00000379433 FOLR2P14207 255 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 NDUFA6P56556 154 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 ERVK11-1P61568 191 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
NEDD9-201ENST00000379433 TMEM182Q6ZP80 229 aaPredicted RBP9□□□□□ -0.97
NEDD9-201ENST00000379433 GCSAMQ8N6F7 178 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 TMEM171Q8WVE6 324 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 WIPI2Q9Y4P8 454 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 TGIF2-C20orf24A0A0A6YYL0 155 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A10PA6NDY2 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A18PA6NE21 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A16PA6NEW6 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A20PA6NIJ5 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A8PA6NJQ4 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A7PA6NKC0 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A22PA8MWA6 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A12PA8MX19 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A5PA8MXJ8 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A23PA8MXZ1 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 OR4A8P0C604 315 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A15PP0C7V4 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A13PP0C7W8 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A14PP0C7W9 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A24PP0C7X0 464 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 UBE2V1Q13404 147 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 SRSF7Q16629 238 aaKnown RBP eCLIP9□□□□□ -0.97
NEDD9-201ENST00000379433 GUCA2BQ16661 112 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 SPANXN5Q5MJ07 72 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 OR5C1Q8NGR4 320 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 GALNT14Q96FL9 552 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 C18orf12Q96KH6 178 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 FLNCQ14315 2725 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms