RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SAPCD1Q5SSQ6 148 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 RGP1Q92546 391 aaPredicted RBP9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 ACSF3Q4G176 576 aaPredicted RBP9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 SLC6A13Q9NSD5 602 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 ARL14EPLP0DKL9 152 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 IL9P15248 144 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM86BQ8N661 226 aa9.71□□□□□ -0.86
PTCHD1-201ENST00000379361 GZMKP49863 264 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 HDHD3Q9BSH5 251 aaPredicted RBP9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 RCC2Q9P258 522 aaKnown RBP9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 FAM214BQ7L5A3 538 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 MPZL1O95297 269 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 FAM89BQ8N5H3 189 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 A0A0U1RQV5 110 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 A0A1W2PPE3 182 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 ERVK11-1P61568 191 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 ATP5IP56385 69 aaPredicted RBP9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 PLA2G2FQ9BZM2 168 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 OR9G4Q8NGQ1 327 aa9.7□□□□□ -0.86
PTCHD1-201ENST00000379361 RBM11P57052 281 aaKnown RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 AURKAIP1Q9NWT8 199 aaPredicted RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 FOXI3A8MTJ6 420 aaPredicted RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 C3AR1Q16581 482 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 FAM57AQ8TBR7 257 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 OR5AN1Q8NGI8 311 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 ITLN1Q8WWA0 313 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 PIEZO2Q9H5I5 2752 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 HSPB9Q9BQS6 159 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 RHOVQ96L33 236 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 KIAA1551Q9HCM1 1747 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 SMIM18P0DKX4 95 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 UBE2V2Q15819 145 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 WDFY2Q96P53 400 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 CCL28Q9NRJ3 127 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 LEPROTL1O95214 131 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM167AQ8TBQ9 72 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 ARPC1AQ92747 370 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 ZNF146Q15072 292 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 TBL2Q9Y4P3 447 aaKnown RBP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 ODAMA1E959 279 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 PRR32B1ATL7 298 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 SSTR5P35346 364 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 MPV17P39210 176 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 EIF3GO75821 320 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM186Q96B77 213 aa9.69□□□□□ -0.86
PTCHD1-201ENST00000379361 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM95Q3KNT9 176 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 ZPLD1Q8TCW7 415 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SLC25A15Q9Y619 301 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 ISXQ2M1V0 245 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 FRRS1LQ9P0K9 344 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 CALYQ9NYX4 217 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SRSF5Q13243 272 aaKnown RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SSBP3Q9BWW4 388 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 TRBV20OR9-2A0A075B6H5 130 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 CKS1BP61024 79 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 AHDC1Q5TGY3 1603 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 OGG1O15527 345 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 HBBP68871 147 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 ATG4DQ86TL0 474 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 TLNRD1Q9H1K6 362 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 CRHP06850 196 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 CRYBB2P43320 205 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 FGF12P61328 243 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 PEX7O00628 323 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 EREGO14944 169 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 MOSPD3O75425 235 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SOD3P08294 240 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 LEPP41159 167 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 OR8D4Q8NGM9 314 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 SAA1P0DJI8 122 aaPredicted RBP9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 PSMG4Q5JS54 123 aa9.68□□□□□ -0.86
PTCHD1-201ENST00000379361 LDLRAD2Q5SZI1 272 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 LEMD1Q68G75 181 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 TCRBV5S2A0A599 114 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 ARF6P62330 175 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 RIMKLAQ8IXN7 391 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 FAM90A26D6RGX4 464 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 RNF133Q8WVZ7 376 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 CYB561D1Q8N8Q1 229 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 TMEM106BQ9NUM4 274 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
PTCHD1-201ENST00000379361 EWSR1Q01844 656 aaKnown RBP eCLIP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms