RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TREML4Q6UXN2 200 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 TUBG2Q9NRH3 451 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 BOKQ9UMX3 212 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-203ENST00000378778 MRPS17Q9Y2R5 130 aaKnown RBP6.84□□□□□ -1.31
PTPRR-203ENST00000378778 TRAV38-1A0A0B4J264 116 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 A0A1B0GUS0 222 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 IZUMO1RA6ND01 250 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-203ENST00000378778 THBS3P49746 956 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 MRPL49Q13405 166 aaKnown RBP6.84□□□□□ -1.31
PTPRR-203ENST00000378778 MMDQ15546 238 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 STPG4Q8N801 248 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 SMRP1Q8NCR6 262 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 APH1AQ96BI3 265 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-203ENST00000378778 UNC13CQ8NB66 2214 aa6.84□□□□□ -1.31
PTPRR-203ENST00000378778 A0A1W2PR80 420 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 HELTA6NFD8 242 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 EPOPA6NHQ4 379 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 K7EN84 100 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 SRFP11831 508 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 NPY1RP25929 384 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 EDDM3BP56851 147 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 RHOGP84095 191 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 TLE1Q04724 770 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 TBR1Q16650 682 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 PQLC2Q6ZP29 291 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 YRDCQ86U90 279 aaKnown RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF439Q8NDP4 499 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 TMEM190Q8WZ59 177 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 MGST2Q99735 147 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 SPTBN5Q9NRC6 3674 aaKnown RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ABCA7Q8IZY2 2146 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 C17orf98A8MV24 154 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 RAMP3O60896 148 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 DUTP33316 252 aaKnown RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 TAS2R45P59539 299 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ERVK-16P61578 105 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 RPL30P62888 115 aaKnown RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF816Q0VGE8 651 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 LRRC10Q5BKY1 277 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 TEPPQ6URK8 271 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 NIT1Q86X76 327 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 MUC15Q8N387 334 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 OR2M7Q8NG81 312 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 OR4A16Q8NH70 328 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ALKBH7Q9BT30 221 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
PTPRR-203ENST00000378778 YTHDF2Q9Y5A9 579 aaKnown RBP6.83□□□□□ -1.32
PTPRR-203ENST00000378778 A0A1W2PRE2 83 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 CCL25O15444 150 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 RBMXL2O75526 392 aaKnown RBP6.82□□□□□ -1.32
PTPRR-203ENST00000378778 HAND1O96004 215 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 APCSP02743 223 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 FOLR3P41439 243 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF83P51522 516 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 PSG7Q13046 419 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ATP5L2Q7Z4Y8 100 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 BATF2Q8N1L9 274 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 SMIM12Q96EX1 92 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 SAP30LQ9HAJ7 183 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF331Q9NQX6 463 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-203ENST00000378778 TECRQ9NZ01 308 aaKnown RBP6.82□□□□□ -1.32
PTPRR-203ENST00000378778 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 WNT16Q9UBV4 365 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 B4GALT7Q9UBV7 327 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-203ENST00000378778 IGLC7A0M8Q6 106 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 C2CD4DB7Z1M9 353 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 C12orf77C9JDV5 145 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 OR2J3O76001 311 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 CA2P00918 260 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 HBZP02008 142 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 PMCHP20382 165 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 BRWD1-AS2P59051 145 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 EFNB3Q15768 340 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF766Q5HY98 468 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ST6GALNAC3Q8NDV1 305 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 OR8B3Q8NGG8 313 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF488Q96MN9 340 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 OR2V2Q96R30 315 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 OR8B2Q96RD0 313 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 PRRG4Q9BZD6 226 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 PLA2G3Q9NZ20 509 aa6.82□□□□□ -1.32
PTPRR-203ENST00000378778 SOX21Q9Y651 276 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-203ENST00000378778 A0A1W2PQM1 296 aa6.81□□□□□ -1.32
PTPRR-203ENST00000378778 IQCF6A8MYZ5 107 aa6.81□□□□□ -1.32
PTPRR-203ENST00000378778 H0YJW9 148 aa6.81□□□□□ -1.32
PTPRR-203ENST00000378778 BMPR1BO00238 502 aa6.81□□□□□ -1.32
PTPRR-203ENST00000378778 SPINT2O43291 252 aa6.81□□□□□ -1.32
PTPRR-203ENST00000378778 KLF7O75840 302 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms