RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 NDUFB3O43676 98 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 FCN3O75636 299 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 LYNX1P0DP58 116 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 BRWD1-AS2P59051 145 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 ZNF816Q0VGE8 651 aaPredicted RBP15.99■□□□□ 0.15
SSU72-204ENST00000378726 CDPF1Q6NVV7 123 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 DPPA3Q6W0C5 159 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 SLC35E3Q7Z769 313 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 FAM216AQ8WUB2 273 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 LINC00574Q9H8X3 128 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 IDI2-AS1Q9NZ38 188 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 GNG13Q9P2W3 67 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 HCFC1P51610 2035 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 CYB5BO43169 146 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 RPL31P62899 125 aaKnown RBP15.98■□□□□ 0.15
SSU72-204ENST00000378726 STX12Q86Y82 276 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 RSG1Q9BU20 258 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIPK2Q9H2X6 1198 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 SIRT7Q9NRC8 400 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 CACNG5Q9UF02 275 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 LINC00312Q9Y6C7 94 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 USF3Q68DE3 2245 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 CXorf65A6NEN9 183 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BKO60814 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BJP06899 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BOP23527 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BBP33778 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BDP58876 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BCP62807 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 MEF2CQ06413 473 aaPredicted RBP15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST2H2BEQ16778 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 LRRC10Q5BKY1 277 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 CT45A1Q5HYN5 189 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.98■□□□□ 0.15
SSU72-204ENST00000378726 SLC25A24Q6NUK1 477 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 TCTEX1D1Q8N7M0 179 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 CT45A3Q8NHU0 189 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BHQ93079 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BNQ99877 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 HIST1H2BMQ99879 126 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 VSIRQ9H7M9 311 aa15.98■□□□□ 0.15
SSU72-204ENST00000378726 ITGB1BP1O14713 200 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 SLC31A2O15432 143 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 MMP23AO75900 390 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 DFFBO76075 338 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 IFNA5P01569 189 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 TRGC2P03986 189 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 IFI27L2Q9H2X8 130 aa15.97■□□□□ 0.15
SSU72-204ENST00000378726 GAR1Q9NY12 217 aaKnown RBP15.97■□□□□ 0.15
SSU72-204ENST00000378726 KRASP01116 189 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 DUTP33316 252 aaKnown RBP15.96■□□□□ 0.15
SSU72-204ENST00000378726 PPOXP50336 477 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 FAM90A2PQ658T7 463 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 NCR3LG1Q68D85 454 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 RPRMQ9NS64 109 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 KAAG1Q9UBP8 84 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 DSCAML1Q8TD84 2053 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 TRAV1-1A0A0B4J248 108 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 DVL1O14640 695 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 RAB7AP51149 207 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 RAB11AP62491 216 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 ARL16Q0P5N6 197 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 RPL39P5Q59GN2 51 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 GFI1BQ5VTD9 330 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 TMEM200BQ69YZ2 307 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 ZNF383Q8NA42 475 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 H1FXQ92522 213 aaKnown RBP15.96■□□□□ 0.15
SSU72-204ENST00000378726 CBLN4Q9NTU7 201 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 CTSZQ9UBR2 303 aa15.96■□□□□ 0.15
SSU72-204ENST00000378726 ZFP92A6NM28 416 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 S1PR2O95136 353 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 IAPPP10997 89 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 G6PCP35575 357 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 ZNF726P1Q15940 193 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 SSX7Q7RTT5 188 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 LRBAP50851 2863 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 M0R1X1 148 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 FGF8P55075 233 aaPredicted RBP15.95■□□□□ 0.14
SSU72-204ENST00000378726 PRAMEF5Q5TYX0 476 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 LCN15Q6UWW0 184 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 OR10G4Q8NGN3 311 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 RAB40CQ96S21 281 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 RAB1BQ9H0U4 201 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 RPUSD1Q9UJJ7 312 aaKnown RBP15.95■□□□□ 0.14
SSU72-204ENST00000378726 GAB2Q9UQC2 676 aa15.95■□□□□ 0.14
SSU72-204ENST00000378726 ZNF787Q6DD87 383 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 GAL3ST2Q9H3Q3 398 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 TANC2Q9HCD6 1990 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 SOD3P08294 240 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 METTL15P1P0C7V9 234 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 CCL3L1P16619 93 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 TMEM30BQ3MIR4 351 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 PDZD11Q5EBL8 140 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 C1orf229Q6ZS94 237 aaPredicted RBP15.94■□□□□ 0.14
SSU72-204ENST00000378726 OR10D4PQ8NGN7 298 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 SCGB1C1Q8TD33 95 aa15.94■□□□□ 0.14
SSU72-204ENST00000378726 IGSF10Q6WRI0 2623 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 BCL2P10415 239 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 GNG10P50151 68 aa15.93■□□□□ 0.14
SSU72-204ENST00000378726 HAPLN4Q86UW8 402 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms