RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MRGPRFQ96AM1 343 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 OR2D2Q9H210 308 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 C1QL1O75973 258 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 MORN3Q6PF18 240 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 OLIG3Q7RTU3 272 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 OR4X1Q8NH49 305 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 ACP7Q6ZNF0 438 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 TBX15Q96SF7 602 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PSG2P11465 335 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 USMG5Q96IX5 58 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 GREB1LQ9C091 1923 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 APOBEC3AP31941 199 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 A0A1B0GUL6 1792 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SCTP09683 121 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 IGKV1-9A0A0C4DH69 117 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 TTC3P53804 2025 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PRRC2BQ5JSZ5 2229 aaKnown RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 OTOL1A6NHN0 477 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 ID4P47928 161 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 OR8I2Q8N0Y5 310 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 DOT1LQ8TEK3 1739 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 NPIPB6E9PJ23 425 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 ATXN8OSP0DMR3 200 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 FAAP20Q6NZ36 180 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 FBXO17Q96EF6 278 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF492Q9P255 531 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 TCF19Q9Y242 345 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 UBE2L5PA0A1B0GUS4 154 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 SMAD9O15198 467 aaKnown RBP4.15□□□□□ -1.74
PCDH9-201ENST00000377861 LINC00477Q96M19 166 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PRSS1P07477 247 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 COX6A1P12074 109 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 CRYBB3P26998 211 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 Q6ZS92 163 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 RPUSD1Q9UJJ7 312 aaKnown RBP4.15□□□□□ -1.74
PCDH9-201ENST00000377861 CEP290O15078 2479 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PPIAL4EA0A075B759 164 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PPIAL4DF5H284 164 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 ACYP1P07311 99 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PPIAL4FP0DN26 164 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 CKS2P33552 79 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 ICAM4Q14773 271 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PPIAL4AQ9Y536 164 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 MMDQ15546 238 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 SLC22A18ASQ8N1D0 253 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 HSPB9Q9BQS6 159 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 GNG7O60262 68 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 HMGN2P46Q86SG4 172 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 SEPSECSQ9HD40 501 aaKnown RBP4.15□□□□□ -1.74
PCDH9-201ENST00000377861 IDI2-AS1Q9NZ38 188 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 STATHP02808 62 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 ASIPP42127 132 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM78Q5T7P6 136 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 IFI27L2Q9H2X8 130 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 PCOLCEQ15113 449 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 SLC50A1Q9BRV3 221 aa4.15□□□□□ -1.74
PCDH9-201ENST00000377861 MTCH1Q9NZJ7 389 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 MYO10Q9HD67 2058 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 OR5AN1Q8NGI8 311 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 CALYQ9NYX4 217 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 C15orf61A6NNL5 157 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF716A6NP11 495 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 MORN2Q502X0 79 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 EFNB3Q15768 340 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 GFERP55789 205 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 TTTY10Q9BZA0 68 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 CD55P08174 381 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF562Q6V9R5 426 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 SLC25A39Q9BZJ4 359 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 PNRC2Q9NPJ4 139 aaKnown RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 SPRY1O43609 319 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 PRSS53Q2L4Q9 553 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 ZCCHC24Q8N2G6 241 aaKnown RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 MAP1LC3AQ9H492 121 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 C20orf24Q9BUV8 137 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 MYPOPQ86VE0 399 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 TUSC5Q8IXB3 177 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 AMN1Q8IY45 258 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 PMVKQ15126 192 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 JKAMPQ9P055 326 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 TSPO2Q5TGU0 170 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF324O75467 553 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-201ENST00000377861 CCL2P13500 99 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 CRYBA4P53673 196 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 DUSP2Q05923 314 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 AICDAQ9GZX7 198 aa4.15□□□□□ -1.75
PCDH9-201ENST00000377861 K7EM74 188 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 A0A1B0GWJ7 208 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 FOXI3A8MTJ6 420 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 IGKV3-15P01624 115 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 C1orf147Q96MC9 270 aaPredicted RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 NPSP0C0P6 89 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 PPP1CCP36873 323 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TRIP6Q15654 476 aaKnown RBP4.14□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM136Q6ZRR5 245 aa4.14□□□□□ -1.75
PCDH9-201ENST00000377861 LRRC29Q8WV35 223 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms