RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 TMEM91Q6ZNR0 172 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
RTN3-206ENST00000377819 NEU3Q9UQ49 428 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 PEX7O00628 323 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 MMP16P51512 607 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 UCP2P55851 309 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 WDR82Q6UXN9 313 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 TAF15Q92804 592 aaKnown RBP eCLIP9.16□□□□□ -0.94
RTN3-206ENST00000377819 G6PC2Q9NQR9 355 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
RTN3-206ENST00000377819 ODAMA1E959 279 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 DPRXA6NFQ7 191 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 CTSVO60911 334 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 ESDP10768 282 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 LEPP41159 167 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 RUNX1Q01196 453 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 ICAM4Q14773 271 aa9.16□□□□□ -0.94
RTN3-206ENST00000377819 PAX4O43316 350 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 PIGYQ3MUY2 71 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 ASB10Q8WXI3 467 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 NPIPB3Q92617 1050 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 TMEM126AQ9H061 195 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 IDI2-AS1Q9NZ38 188 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 TMEFF2Q9UIK5 374 aaPredicted RBP9.15□□□□□ -0.94
RTN3-206ENST00000377819 A0A1W2PQD3 144 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 PROB1E7EW31 1015 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
RTN3-206ENST00000377819 DDTP30046 118 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
RTN3-206ENST00000377819 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 FAM57AQ8TBR7 257 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 A0A1B0GUT8 65 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 CTGFP29279 349 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 MAVSQ7Z434 540 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 GATD1Q8NB37 220 aa9.15□□□□□ -0.94
RTN3-206ENST00000377819 CCL4P13236 92 aa9.15□□□□□ -0.95
RTN3-206ENST00000377819 FOXB2Q5VYV0 432 aa9.15□□□□□ -0.95
RTN3-206ENST00000377819 VKORC1Q9BQB6 163 aa9.15□□□□□ -0.95
RTN3-206ENST00000377819 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 VSIG10L2P0DP72 767 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 Q6AWC8 147 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 OR4D11Q8NGI4 311 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 MRM2Q9UI43 246 aaKnown RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 MYO18BQ8IUG5 2567 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 RBBP6Q7Z6E9 1792 aaKnown RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 A8MWV9 139 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 H3BTX0 84 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 GCM2O75603 506 aaPredicted RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 SRSF4Q08170 494 aaKnown RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 ALKAL1Q6UXT8 129 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 HOGA1Q86XE5 327 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 TRBV5-4A0A0C4DH59 114 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 H0Y980 276 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 ZIC3O60481 467 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 IGHV4-39P01824 125 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 SMIM18P0DKX4 95 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 FHITP49789 147 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 RBMY1FQ15415 496 aaKnown RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 GTSCR1Q86UQ5 136 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 ST6GALNAC2Q9UJ37 374 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 NAV1Q8NEY1 1877 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 TCRBV16S1A1N1A0A5B0 115 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 CMC4P56277 68 aaPredicted RBP9.14□□□□□ -0.95
RTN3-206ENST00000377819 PNKDQ8N490 385 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 C17orf47Q8NEP4 570 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 LOXL4Q96JB6 756 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
RTN3-206ENST00000377819 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 A0A0U1RRA0 63 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 LILRA1O75019 489 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 NBEAP1P0C6P0 100 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 ST6GALNAC3Q8NDV1 305 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 CCL19Q99731 98 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 GGTLC1Q9BX51 225 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 CCDC88CQ9P219 2028 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 ROS1P08922 2347 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 A0A1B0GW15 77 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 KLK8O60259 260 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 GZMBP10144 247 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 TCF19Q9Y242 345 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 A0A1B0GV90 55 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 SIGLEC14Q08ET2 396 aa9.13□□□□□ -0.95
RTN3-206ENST00000377819 FGFRL1Q8N441 504 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms