RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 MYOD1P15172 320 aa15.02□□□□□ -0.01
SF1-203ENST00000377387 TRIP6Q15654 476 aaKnown RBP15.02□□□□□ -0.01
SF1-203ENST00000377387 TREML4Q6UXN2 200 aa15.02□□□□□ -0.01
SF1-203ENST00000377387 C1orf229Q6ZS94 237 aaPredicted RBP15.02□□□□□ -0.01
SF1-203ENST00000377387 PRR7Q8TB68 274 aa15.02□□□□□ -0.01
SF1-203ENST00000377387 ZNF292O60281 2723 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 TSTD3H0UI37 97 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 GZMBP10144 247 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 DDTP30046 118 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 LINC01551Q86U37 167 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 SPRY3O43610 288 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 THBS3P49746 956 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 VWC2Q2TAL6 325 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 MOGAT3Q86VF5 341 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 ANAPC16Q96DE5 110 aa15.01□□□□□ -0.01
SF1-203ENST00000377387 ADH4P08319 380 aa15□□□□□ -0.01
SF1-203ENST00000377387 ERVK-16P61578 105 aa15□□□□□ -0.01
SF1-203ENST00000377387 DEFB108BQ8NET1 73 aa15□□□□□ -0.01
SF1-203ENST00000377387 S1PR3Q99500 378 aa15□□□□□ -0.01
SF1-203ENST00000377387 KALRNO60229 2985 aa15□□□□□ -0.01
SF1-203ENST00000377387 PTPRBP23467 1997 aa15□□□□□ -0.01
SF1-203ENST00000377387 HPRT1P00492 218 aa15□□□□□ -0.01
SF1-203ENST00000377387 PKIAP61925 76 aa15□□□□□ -0.01
SF1-203ENST00000377387 DUX4L9Q6RFH8 374 aaPredicted RBP15□□□□□ -0.01
SF1-203ENST00000377387 MGST2Q99735 147 aa15□□□□□ -0.01
SF1-203ENST00000377387 PXMP4Q9Y6I8 212 aa15□□□□□ -0.01
SF1-203ENST00000377387 A0A1B0GV90 55 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 IL3RAP26951 378 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 TCF23Q7RTU1 214 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 TMEM140Q9NV12 185 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 SCO2A0A1W2PP80 73 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 RBFOX2O43251 390 aaKnown RBP eCLIP14.99□□□□□ -0.019e-11■■■■■ 27.3
SF1-203ENST00000377387 KITLGP21583 273 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 SPATA31B1PQ5VZV4 182 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 TGIF2LYQ8IUE0 185 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 MRPL41Q8IXM3 137 aaKnown RBP14.99□□□□□ -0.01
SF1-203ENST00000377387 TMEM170AQ8WVE7 144 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 OR2V2Q96R30 315 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 M0R1B8 84 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 SPCS3P61009 180 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 KCNIP4Q6PIL6 250 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 ANKRD11Q6UB99 2663 aaPredicted RBP14.99□□□□□ -0.01
SF1-203ENST00000377387 DSCAMO60469 2012 aa14.99□□□□□ -0.01
SF1-203ENST00000377387 HTD2P86397 168 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 JOSD1Q15040 202 aaPredicted RBP14.98□□□□□ -0.01
SF1-203ENST00000377387 GCSAMQ8N6F7 178 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 SGMS2Q8NHU3 365 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 ACACAQ13085 2346 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 RELNP78509 3460 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 TRBV20OR9-2A0A075B6H5 130 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 TRAPPC1Q9Y5R8 145 aa14.98□□□□□ -0.01
SF1-203ENST00000377387 GFRA3O60609 400 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 ACTL6BO94805 426 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 IGHG3P01860 377 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 ZNF664Q8N3J9 261 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 GGTLC1Q9BX51 225 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 TCF19Q9Y242 345 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 GGCTO75223 188 aaKnown RBP14.97□□□□□ -0.01
SF1-203ENST00000377387 FOXH1O75593 365 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 RNF224P0DH78 156 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 GNG10P50151 68 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 RELBQ01201 579 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 GUSBP1Q15486 140 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 ACTL10Q5JWF8 245 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 ZNF600Q6ZNG1 722 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 SEPSECSQ9HD40 501 aaKnown RBP14.97□□□□□ -0.01
SF1-203ENST00000377387 PROCRQ9UNN8 238 aa14.97□□□□□ -0.01
SF1-203ENST00000377387 PDE6DO43924 150 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 BHLHA15Q7RTS1 189 aaPredicted RBP14.96□□□□□ -0.01
SF1-203ENST00000377387 PKDREJQ9NTG1 2253 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 F6UZH7 168 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 VENTXO95231 258 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 VDAC2P45880 294 aaPredicted RBP14.96□□□□□ -0.01
SF1-203ENST00000377387 TMEM256Q8N2U0 113 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 IFI27L2Q9H2X8 130 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 ZNF71Q9NQZ8 489 aaPredicted RBP14.96□□□□□ -0.01
SF1-203ENST00000377387 ZNRD1Q9P1U0 126 aa14.96□□□□□ -0.01
SF1-203ENST00000377387 SRRM5B3KS81 715 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 DVL1O14640 695 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 MGST3O14880 152 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 SRP14P37108 136 aaKnown RBP14.96□□□□□ -0.02
SF1-203ENST00000377387 LOXL3P58215 753 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 DEFB109BQ30KR1 87 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 LYG1Q8N1E2 194 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 SARAFQ96BY9 339 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 STARD4Q96DR4 205 aa14.96□□□□□ -0.02
SF1-203ENST00000377387 PRR33A8MZF0 331 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 SNRPCP09234 159 aaKnown RBP14.95□□□□□ -0.02
SF1-203ENST00000377387 CNN1P51911 297 aaKnown RBP14.95□□□□□ -0.02
SF1-203ENST00000377387 RPP30P78346 268 aaKnown RBP14.95□□□□□ -0.02
SF1-203ENST00000377387 RPRMLQ8N4K4 120 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 OCC1Q8TAD7 63 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 ITLN1Q8WWA0 313 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 CALYQ9NYX4 217 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 YTHDF2Q9Y5A9 579 aaKnown RBP14.95□□□□□ -0.02
SF1-203ENST00000377387 MDFIC2A0A1B0GVS7 189 aa14.95□□□□□ -0.02
SF1-203ENST00000377387 ZNF891A8MT65 544 aaPredicted RBP14.95□□□□□ -0.02
SF1-203ENST00000377387 SLC17A3O00476 420 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms