RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 MEF2BQ02080 365 aaPredicted RBP15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 RRN3P1Q2M238 152 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 EEF1AKMT3Q96AZ1 226 aa15.11■□□□□ 0.01
CLSTN1-202ENST00000377298 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 MGPP08493 103 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 RPL7P18124 248 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 ZNF880Q6PDB4 577 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 GALNT14Q96FL9 552 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 MRPL37Q9BZE1 423 aaKnown RBP15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 PLAUP00749 431 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 RELQ04864 619 aaPredicted RBP15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 SPANXN1Q5VSR9 72 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 A8MWL6 223 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 TMEM116Q8NCL8 245 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 OR51G1Q8NGK1 321 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 ZNF137PP52743 207 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 PLSCR4Q9NRQ2 329 aa15.1■□□□□ 0.01
CLSTN1-202ENST00000377298 PGPA6NDG6 321 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 HSPB1P04792 205 aaKnown RBP15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 CYB561D1Q8N8Q1 229 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 ZNF738Q8NE65 137 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 YAE1D1Q9NRH1 226 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 A0A087X0M5 115 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 TMSB15BA0A087X1C1 80 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 IGHV1-18A0A0C4DH31 117 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 A0A1B0GX30 115 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 REG1AP05451 166 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 Q0VFX4 171 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 A0A0B4J293 547 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 UCP1P25874 307 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 DDB2Q92466 427 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 TGFAP01135 160 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 CLPSP04118 112 aa15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 EIF4E3Q8N5X7 224 aaKnown RBP15.09■□□□□ 0.01
CLSTN1-202ENST00000377298 C1QL1O75973 258 aa15.08■□□□□ 0.01
CLSTN1-202ENST00000377298 PRSS1P07477 247 aa15.08■□□□□ 0.01
CLSTN1-202ENST00000377298 PACRGQ96M98 296 aaPredicted RBP15.08■□□□□ 0.01
CLSTN1-202ENST00000377298 RTTNQ86VV8 2226 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 NDUFB4O95168 129 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 PSG9Q00887 426 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 ZNF418Q8TF45 676 aaPredicted RBP15.08■□□□□ 0
CLSTN1-202ENST00000377298 RAB24Q969Q5 203 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 HIST3H3Q16695 136 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 NPIPB3Q92617 1050 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 LYZL4Q96KX0 146 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 M0R2Z0 102 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 VAMP3Q15836 100 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 DHRS11Q6UWP2 260 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 MDS2Q8NDY4 140 aa15.08■□□□□ 0
CLSTN1-202ENST00000377298 AURKAIP1Q9NWT8 199 aaPredicted RBP15.08■□□□□ 0
CLSTN1-202ENST00000377298 SNRPCP09234 159 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 RPL13AP40429 203 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 GTF3AQ92664 365 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 TMEM189A5PLL7 270 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 SNURFLB1AK76 121 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 J3QRE1 110 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 CRYGSP22914 178 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 IER3P46695 156 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 MRPL32Q9BYC8 188 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 INTS1Q8N201 2190 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 IGHV3OR16-12A0A075B7B8 117 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 NPPCP23582 126 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 CDKN1AP38936 164 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 KIR2DL2P43627 348 aaPredicted RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 RPL29P47914 159 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 HNRNPA3P51991 378 aaKnown RBP15.07■□□□□ 0
CLSTN1-202ENST00000377298 WDR82Q6UXN9 313 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 GATAD1Q8WUU5 269 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 RALGAPA1Q6GYQ0 2036 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 IGKV1-9A0A0C4DH69 117 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 CD8AP01732 235 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 CCKARP32238 428 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 ZNF383Q8NA42 475 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 MGAMO43451 1857 aa15.07■□□□□ 0
CLSTN1-202ENST00000377298 FOXF2Q12947 444 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 ZNF385CQ66K41 422 aaPredicted RBP15.06■□□□□ 0
CLSTN1-202ENST00000377298 OR51M1Q9H341 326 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 PTBP3O95758 552 aaKnown RBP15.06■□□□□ 0
CLSTN1-202ENST00000377298 OR10S1Q8NGN2 331 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 SGMS2Q8NHU3 365 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 GPR179Q6PRD1 2367 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 APCSP02743 223 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 LINC00518Q8N0U6 118 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 RAX2Q96IS3 184 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 C7orf69Q9H7B7 122 aa15.06■□□□□ 0
CLSTN1-202ENST00000377298 CA2P00918 260 aa15.05■□□□□ 0
CLSTN1-202ENST00000377298 ZP1P60852 638 aa15.05■□□□□ 0
CLSTN1-202ENST00000377298 NABP2Q9BQ15 211 aa15.05■□□□□ 0
CLSTN1-202ENST00000377298 HSPB7Q9UBY9 170 aa15.05■□□□□ 0
CLSTN1-202ENST00000377298 TMEM183BQ1AE95 376 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 TMEM97Q5BJF2 176 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 PLPPR1Q8TBJ4 325 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 PSMG3Q9BT73 122 aaPredicted RBP15.05■□□□□ -0
CLSTN1-202ENST00000377298 FBXL15Q9H469 300 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 LRP11Q86VZ4 500 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 WDFY1Q8IWB7 410 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 VPS25Q9BRG1 176 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 TMEM191AQ9H0A3 160 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 FUT9Q9Y231 359 aa15.05■□□□□ -0
CLSTN1-202ENST00000377298 PLXNA3P51805 1871 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms