RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 OR13D1Q8NGV5 346 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CT45A3Q8NHU0 189 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 OR2V2Q96R30 315 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 MGST2Q99735 147 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PSG11Q9UQ72 335 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 IGHV3OR15-7A0A075B7D8 119 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 DEFA4P12838 97 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 GABRA2P47869 451 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 OR2B8PP59922 312 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 PKIAP61925 76 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 PRDM13Q9H4Q3 707 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 FOXA2Q9Y261 457 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-202ENST00000376659 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 KBTBD11O94819 623 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 IFNA10P01566 189 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 IGHV1-46P01743 117 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 NPSP0C0P6 89 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 GZMHP20718 246 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 TAGLN2P37802 199 aaKnown RBP7.88□□□□□ -1.15
TRIM39-202ENST00000376659 MEF2BQ02080 365 aaPredicted RBP7.88□□□□□ -1.15
TRIM39-202ENST00000376659 MRGPRG-AS1Q2M3A8 158 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 C1orf185Q5T7R7 199 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 VHLLQ6RSH7 139 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 ZNRF1Q8ND25 227 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 OR2Z1Q8NG97 314 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF596Q8TC21 504 aa7.88□□□□□ -1.15
TRIM39-202ENST00000376659 DEFB108AA8MXU0 73 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 HPRT1P00492 218 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 HIST1H1BP16401 226 aaKnown RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 LCN15Q6UWW0 184 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ZCCHC14Q8WYQ9 949 aaKnown RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 R3HDM4Q96D70 268 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 LAMP3Q9UQV4 416 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 SVEP1Q4LDE5 3571 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 SAA2-SAA4A0A096LPE2 208 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 C15orf61A6NNL5 157 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 RRHO14718 337 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 MMP23AO75900 390 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 C1QTNF9P0C862 333 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 SAA2P0DJI9 122 aaPredicted RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 IL2RGP31785 369 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 RPL23P62829 140 aaKnown RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 CATR1Q13166 79 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ADAM5Q6NVV9 412 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 Q8NA96 180 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 NIPSNAP3BQ9BS92 247 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 CALYQ9NYX4 217 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 RPH3ALQ9UNE2 315 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 LRBAP50851 2863 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 THBDP07204 575 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 S100A7P31151 101 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ARSJQ5FYB0 599 aaPredicted RBP7.87□□□□□ -1.15
TRIM39-202ENST00000376659 GCSAMLQ5JQS6 135 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF788Q6ZQV5 615 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 OR10D4PQ8NGN7 298 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 SFXN3Q9BWM7 321 aa7.87□□□□□ -1.15
TRIM39-202ENST00000376659 ZFP92A6NM28 416 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 TMPRSS2O15393 492 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 ELLP55199 621 aaPredicted RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 OR8G2PQ6IF36 304 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 HIST3H2BBQ8N257 126 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 RFESDQ8TAC1 157 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF835Q9Y2P0 537 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 DIDO1Q9BTC0 2240 aaKnown RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 CEP250Q9BV73 2442 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 SOD3P08294 240 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 FGF7P21781 194 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF83P51522 516 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 TMEM144Q7Z5S9 345 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 ITLN1Q8WWA0 313 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 CIB3Q96Q77 187 aaPredicted RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 GGTLC1Q9BX51 225 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 MANBALQ9NQG1 85 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 GAR1Q9NY12 217 aaKnown RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 IDI2-AS1Q9NZ38 188 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 ANKRD11Q6UB99 2663 aaPredicted RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 KBTBD11-OT1A0A1B0GTJ5 212 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 A8MXE2 369 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 DLEU1O43261 78 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 OPRK1P41145 380 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 CDX1P47902 265 aaPredicted RBP7.86□□□□□ -1.15
TRIM39-202ENST00000376659 FAM201AQ5SY85 155 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 MOGAT3Q86VF5 341 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 VKORC1L1Q8N0U8 176 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 FAM57AQ8TBR7 257 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 C22orf15Q8WYQ4 148 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 SLC25A22Q9H936 323 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
TRIM39-202ENST00000376659 SVILO95425 2214 aa7.85□□□□□ -1.15
TRIM39-202ENST00000376659 CGB1A6NKQ9 187 aa7.85□□□□□ -1.15
TRIM39-202ENST00000376659 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
TRIM39-202ENST00000376659 PDLIM4P50479 330 aa7.85□□□□□ -1.15
TRIM39-202ENST00000376659 RAB11AP62491 216 aa7.85□□□□□ -1.15
TRIM39-202ENST00000376659 SLC25A48Q6ZT89 311 aaKnown RBP7.85□□□□□ -1.15
TRIM39-202ENST00000376659 ZNF833PQ6ZTB9 187 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms