RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 BCL3P20749 454 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 CDKN1BP46527 198 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 GNB1P62873 340 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 DERL1Q9BUN8 251 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 SLC45A2Q9UMX9 530 aa12.59□□□□□ -0.39
CCHCR1-201ENST00000376266 MBD3L4A6NDZ8 208 aaPredicted RBP12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 MBD3L3A6NE82 208 aaPredicted RBP12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 MBD3L5A6NJ08 208 aaPredicted RBP12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 PATE4P0C8F1 98 aa12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 FOXF2Q12947 444 aa12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 MBD3L2Q8NHZ7 208 aaPredicted RBP12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 MRPL18Q9H0U6 180 aaKnown RBP12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 UQCR10Q9UDW1 63 aa12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 DOCK7Q96N67 2140 aa12.58□□□□□ -0.39
CCHCR1-201ENST00000376266 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 TMPRSS2O15393 492 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 UBE2G2P60604 165 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 Q6ZN92 141 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF114Q8NC26 417 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 RNF2Q99496 336 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 LAMTOR2Q9Y2Q5 125 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 hCG_38984A0A1B0GV85 526 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A10PA6NDY2 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A18PA6NE21 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A16PA6NEW6 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A20PA6NIJ5 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A8PA6NJQ4 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A7PA6NKC0 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A22PA8MWA6 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A12PA8MX19 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A5PA8MXJ8 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A23PA8MXZ1 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 F6UZH7 168 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 PDE6DO43924 150 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A15PP0C7V4 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A13PP0C7W8 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A14PP0C7W9 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM90A24PP0C7X0 464 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 DEFA4P12838 97 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 HNRNPA3P51991 378 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF90Q03938 601 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 C12orf49Q9H741 205 aa12.58□□□□□ -0.4
CCHCR1-201ENST00000376266 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 TRAV39A0A0B4J263 110 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 F2Z2F3 143 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 CNEP1R1Q8N9A8 125 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 OR1L6Q8NGR2 347 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 PPP1R3CQ9UQK1 317 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF462Q96JM2 2506 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 SS18L1O75177 396 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 IGHV3-9P01782 118 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 CEACAM8P31997 349 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 CA7P43166 264 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 UQCRFS1P47985 274 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 ATP5G3P48201 142 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 ATP6V1FQ16864 119 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 TMEM14EPQ6UXP3 125 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 C1orf174Q8IYL3 243 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 IL1F10Q8WWZ1 152 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 IL36RNQ9UBH0 155 aa12.57□□□□□ -0.4
CCHCR1-201ENST00000376266 HNF1AP20823 631 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 TIMP3P35625 211 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 UBE2V1Q13404 147 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 GUSBP1Q15486 140 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 OR5P3Q8WZ94 311 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 STARD4Q96DR4 205 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 FREM1Q5H8C1 2179 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 PCNX1Q96RV3 2341 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF32P17041 273 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 GNLYP22749 145 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 CTRLP40313 264 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 KIR2DL2P43627 348 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 TFF3Q07654 80 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 VWA1Q6PCB0 445 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 OR10G8Q8NGN5 311 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 GP6Q9HCN6 339 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 ZNF391Q9UJN7 358 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 RNF114Q9Y508 228 aa12.56□□□□□ -0.4
CCHCR1-201ENST00000376266 TRAV34A0A0B4J273 112 aa12.55□□□□□ -0.4
CCHCR1-201ENST00000376266 K7EP13 123 aa12.55□□□□□ -0.4
CCHCR1-201ENST00000376266 FCN1O00602 326 aa12.55□□□□□ -0.4
CCHCR1-201ENST00000376266 CDC34P49427 236 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-201ENST00000376266 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
CCHCR1-201ENST00000376266 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms