RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ANKRD55Q3KP44 614 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 CDNFQ49AH0 187 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 CNIH2Q6PI25 160 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 AIFM2Q9BRQ8 373 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 ST6GALNAC5Q9BVH7 336 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 KLK9Q9UKQ9 250 aa17.47■□□□□ 0.39
C9orf47-202ENST00000375850 EPPK1P58107 5090 aaKnown RBP17.46■□□□□ 0.39
C9orf47-202ENST00000375850 A8MWP6 167 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 PPP5D1E7EU14 171 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 OR2C1O95371 312 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 HRASP01112 189 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 CRYGCP07315 174 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 ZNF735P0CB33 412 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 CBLN1P23435 193 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 ZNF66Q6ZN08 573 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 PUSL1Q8N0Z8 303 aaKnown RBP17.46■□□□□ 0.39
C9orf47-202ENST00000375850 EEF1AKMT3Q96AZ1 226 aa17.46■□□□□ 0.39
C9orf47-202ENST00000375850 FYTTD1Q96QD9 318 aaKnown RBP17.46■□□□□ 0.39
C9orf47-202ENST00000375850 HMX3A6NHT5 357 aa17.45■□□□□ 0.38
C9orf47-202ENST00000375850 NFYAP23511 347 aaPredicted RBP17.45■□□□□ 0.38
C9orf47-202ENST00000375850 ARL3P36405 182 aa17.45■□□□□ 0.38
C9orf47-202ENST00000375850 RPL30P62888 115 aaKnown RBP17.45■□□□□ 0.38
C9orf47-202ENST00000375850 ZNF57Q68EA5 555 aaPredicted RBP17.45■□□□□ 0.38
C9orf47-202ENST00000375850 TCTEX1D2Q8WW35 142 aa17.45■□□□□ 0.38
C9orf47-202ENST00000375850 WDR89Q96FK6 387 aaPredicted RBP17.45■□□□□ 0.38
C9orf47-202ENST00000375850 VCX3BQ9H321 246 aa17.45■□□□□ 0.38
C9orf47-202ENST00000375850 J3QRK9 145 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 IGLV2-14P01704 120 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 IL6RP08887 468 aaPredicted RBP17.44■□□□□ 0.38
C9orf47-202ENST00000375850 PSMB6P28072 239 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 HSPA13P48723 471 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 MSMO1Q15800 293 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 OR2B11Q5JQS5 317 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 MARC2Q969Z3 335 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 CXorf58Q96LI9 332 aa17.44■□□□□ 0.38
C9orf47-202ENST00000375850 TRBV7-1A0A0A6YYK4 115 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 HLA-AP01891 365 aaKnown RBP17.43■□□□□ 0.38
C9orf47-202ENST00000375850 RPL8P62917 257 aaKnown RBP17.43■□□□□ 0.38
C9orf47-202ENST00000375850 CLEC19AQ6UXS0 136 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 VKORC1L1Q8N0U8 176 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 MFSD4AQ8N468 514 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 OR4A5Q8NH83 315 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 NRG4Q8WWG1 115 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 CCDC140Q96MF4 163 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 FANCD2OSQ96PS1 177 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 GGTLC1Q9BX51 225 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 ANXA10Q9UJ72 324 aa17.43■□□□□ 0.38
C9orf47-202ENST00000375850 TRAV25A0A0B4J276 109 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 NOTOA8MTQ0 251 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 CTRB1P17538 263 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 GNG2P59768 71 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 EIF4EBP1Q13541 118 aaPredicted RBP17.42■□□□□ 0.38
C9orf47-202ENST00000375850 CTRB2Q6GPI1 263 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 TMEM61Q8N0U2 210 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 OR52B4Q8NGK2 314 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 WFDC10AQ9H1F0 79 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 ELF5Q9UKW6 265 aaPredicted RBP17.42■□□□□ 0.38
C9orf47-202ENST00000375850 SPATA2Q9UM82 520 aa17.42■□□□□ 0.38
C9orf47-202ENST00000375850 IGKV1D-13A0A0B4J2D9 117 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 ZNF320A2RRD8 509 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 TMEM213A2RRL7 107 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 MRPS14O60783 128 aaKnown RBP17.41■□□□□ 0.38
C9orf47-202ENST00000375850 NDUFB8O95169 186 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 IGKV1-13P0DP09 117 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 DEFA4P12838 97 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 C22orf42Q6IC83 251 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 BET1LQ9NYM9 111 aa17.41■□□□□ 0.38
C9orf47-202ENST00000375850 LOC102724200A0A096LPH7 203 aaPredicted RBP17.4■□□□□ 0.38
C9orf47-202ENST00000375850 HLA-GP17693 338 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 FGF9P31371 208 aaPredicted RBP17.4■□□□□ 0.38
C9orf47-202ENST00000375850 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 NR2C2APQ86WQ0 139 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 UXS1Q8NBZ7 420 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 ZBTB34Q8NCN2 500 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 NUDCD2Q8WVJ2 157 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 SRSF8Q9BRL6 282 aaKnown RBP17.4■□□□□ 0.38
C9orf47-202ENST00000375850 TAS2R8Q9NYW2 309 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 THYN1Q9P016 225 aa17.4■□□□□ 0.38
C9orf47-202ENST00000375850 IGLV11-55A0A075B6I3 123 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 TMEM235A6NFC5 223 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 E7EUB6 86 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 RBFOX2O43251 390 aaKnown RBP eCLIP17.39■□□□□ 0.37
C9orf47-202ENST00000375850 FGF2P09038 288 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 AREGP15514 252 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 ELLP55199 621 aaPredicted RBP17.39■□□□□ 0.37
C9orf47-202ENST00000375850 MLXQ9UH92 298 aa17.39■□□□□ 0.37
C9orf47-202ENST00000375850 CYB5BO43169 146 aa17.38■□□□□ 0.37
C9orf47-202ENST00000375850 EDN2P20800 178 aa17.38■□□□□ 0.37
C9orf47-202ENST00000375850 BRWD1-AS2P59051 145 aa17.38■□□□□ 0.37
C9orf47-202ENST00000375850 CACNG8Q8WXS5 425 aa17.38■□□□□ 0.37
C9orf47-202ENST00000375850 MRPL27Q9P0M9 148 aaKnown RBP17.38■□□□□ 0.37
C9orf47-202ENST00000375850 UFC1Q9Y3C8 167 aa17.38■□□□□ 0.37
C9orf47-202ENST00000375850 A0A1B0GW64 132 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 IGHV3-23P01764 117 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 CLEC3BP05452 202 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 C8orf88P0DMB2 117 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 MYOD1P15172 320 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 SCAND1P57086 179 aa17.37■□□□□ 0.37
C9orf47-202ENST00000375850 RBPMS2Q6ZRY4 209 aaKnown RBP17.37■□□□□ 0.37
C9orf47-202ENST00000375850 TP53TG1Q9Y2A0 90 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms