RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 OR56B2PQ8NGI1 322 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 PMS2P5A8MQ11 134 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 DIRC3C9JPN6 131 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 SH2D1BO14796 132 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
MSH5-204ENST00000375755 C1orf174Q8IYL3 243 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 FGFRL1Q8N441 504 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 UBALD1Q8TB05 177 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 ZNF488Q96MN9 340 aa10.8□□□□□ -0.68
MSH5-204ENST00000375755 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 SYNGR1O43759 233 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 CLEC2AQ6UVW9 174 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 GCNT2Q8N0V5 402 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 TMEM45BQ96B21 275 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 MAP1BP46821 2468 aaKnown RBP10.79□□□□□ -0.68
MSH5-204ENST00000375755 TIMP3P35625 211 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 ZNF90Q03938 601 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 RIPPLY2Q5TAB7 128 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 RNF2Q99496 336 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 TMEM204Q9BSN7 226 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 LAMTOR2Q9Y2Q5 125 aa10.79□□□□□ -0.68
MSH5-204ENST00000375755 TRAV38-1A0A0B4J264 116 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 SLC17A3O00476 420 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 KALRNO60229 2985 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 WDR1O75083 606 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 HYPMO75409 117 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 IGFBP7Q16270 282 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 ATP6V1FQ16864 119 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 KRTCAP3Q53RY4 240 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 OR10G8Q8NGN5 311 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 KCNIP2Q9NS61 270 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 FAM90A26D6RGX4 464 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 KLF3P57682 345 aaPredicted RBP10.78□□□□□ -0.68
MSH5-204ENST00000375755 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
MSH5-204ENST00000375755 HLA-DRB5Q30154 266 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 Q6ZN92 141 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 ASCL5Q7RTU5 278 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 OR5A2Q8NGI9 324 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
MSH5-204ENST00000375755 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 RBM7Q9Y580 266 aaKnown RBP10.78□□□□□ -0.68
MSH5-204ENST00000375755 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.78□□□□□ -0.68
MSH5-204ENST00000375755 GPX1P07203 203 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 Q0VG73 95 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 APH1AQ96BI3 265 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 TXN2Q99757 166 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 VPS25Q9BRG1 176 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
MSH5-204ENST00000375755 ADGRG4Q8IZF6 3080 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 TRBV6-6A0A0A6YYG2 114 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 LRP5LA4QPB2 252 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 FCN1O00602 326 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 NGFP01138 241 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 CDKN1BP46527 198 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 IER3P46695 156 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 MKXQ8IYA7 352 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 SAXO1Q8IYX7 474 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 LYG1Q8N1E2 194 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 STARD4Q96DR4 205 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 GNB4Q9HAV0 340 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 ZNF586Q9NXT0 402 aa10.77□□□□□ -0.68
MSH5-204ENST00000375755 TBL2Q9Y4P3 447 aaKnown RBP10.77□□□□□ -0.68
MSH5-204ENST00000375755 C5orf49A4QMS7 147 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 M0QZ24 198 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
MSH5-204ENST00000375755 UNQ5815/PRO19632Q6UWF5 114 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 Q8N7P7 452 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
MSH5-204ENST00000375755 C1QTNF5Q9BXJ0 243 aa10.77□□□□□ -0.69
MSH5-204ENST00000375755 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 LOC105371242A0A075B767 164 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 SCO2A0A1W2PP80 73 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 K7EM74 188 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 ZG16O60844 167 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 PSG7Q13046 419 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 MCEMP1Q8IX19 187 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 DRAM1Q8N682 238 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 TMEM178AQ8NBL3 297 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 NRN1Q9NPD7 142 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 GTF3C1Q12789 2109 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 RP1L1Q8IWN7 2480 aaPredicted RBP10.76□□□□□ -0.69
MSH5-204ENST00000375755 K7EP13 123 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 DEGS1O15121 323 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 G6PCP35575 357 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 APC2O95996 2303 aa10.76□□□□□ -0.69
MSH5-204ENST00000375755 SNURFLB1AK76 121 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms