RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SP1P08047 785 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 EGR1P18146 543 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF766Q5HY98 468 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 SPANXN5Q5MJ07 72 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 FAM58AQ8N1B3 248 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 NCOA6Q14686 2063 aaPredicted RBP10.22□□□□□ -0.77
C9orf3-203ENST00000375315 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 SIRPB1O00241 398 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 NAPSAO96009 420 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 CD46P15529 392 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 CTSSP25774 331 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 NTF4P34130 210 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
C9orf3-203ENST00000375315 ASCL4Q6XD76 172 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 C12orf49Q9H741 205 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 TRAV9-2A0A087WT02 112 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 IGLV3-32A0A0A0MS00 114 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 A0A1W2PS18 150 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 CRYAAP02489 173 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 TIMP3P35625 211 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 GUCA1AP43080 201 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-203ENST00000375315 NHLH1Q02575 133 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 CNN3Q15417 329 aaKnown RBP10.21□□□□□ -0.77
C9orf3-203ENST00000375315 VWA1Q6PCB0 445 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 OXGR1Q96P68 337 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 CACNG5Q9UF02 275 aa10.21□□□□□ -0.77
C9orf3-203ENST00000375315 SLC22A20A6NK97 555 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 DLL1O00548 723 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 GFRA1P56159 465 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 PSG4Q00888 419 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 KRTCAP3Q53RY4 240 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF114Q8NC26 417 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 BORCS8Q96FH0 119 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 B4GALT7Q9UBV7 327 aa10.21□□□□□ -0.78
C9orf3-203ENST00000375315 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 MT-ND6P03923 174 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 F2RP25116 425 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 ARR3P36575 388 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 HTD2P86397 168 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 FAM71F2Q6NXP2 309 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 TNRC6AQ8NDV7 1962 aaKnown RBP10.2□□□□□ -0.78
C9orf3-203ENST00000375315 POLEQ07864 2286 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 A0A096LPE4 126 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 A0A1W2PPZ6 126 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 A0A1W2PR80 420 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 ODAMA1E959 279 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 PGLYRP1O75594 196 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-203ENST00000375315 CDC34P49427 236 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-203ENST00000375315 SLC25A53Q5H9E4 307 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 SLC25A47Q6Q0C1 308 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 OR10P1Q8NGE3 313 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 ULBP2Q9BZM5 246 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 MYO7BQ6PIF6 2116 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 IGKV1D-13A0A0B4J2D9 117 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 K7EM74 188 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 CA2P00918 260 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 IGKV1-13P0DP09 117 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF83P51522 516 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 IZUMO4Q1ZYL8 232 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 DOCK11Q5JSL3 2073 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 WDR73Q6P4I2 378 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF71Q9NQZ8 489 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-203ENST00000375315 IL36GQ9NZH8 169 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 NAT8BQ9UHF3 227 aa10.2□□□□□ -0.78
C9orf3-203ENST00000375315 KLRC4-KLRK1H3BQV0 150 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 RAMP3O60896 148 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 B4GALT1P15291 398 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 CCNOP22674 350 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 LGALS4P56470 323 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 RHOBP62745 196 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 HIST3H3Q16695 136 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 AAED1Q7RTV5 226 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 GGNQ86UU5 652 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 OR4P4Q8NGL7 312 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 APOBEC3DQ96AK3 386 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-203ENST00000375315 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 TLX3O43711 291 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-203ENST00000375315 ATP5G3P48201 142 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 THBS3P49746 956 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF324BQ6AW86 544 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-203ENST00000375315 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 Q6ZPA2 131 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 LHFPL2Q6ZUX7 228 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 TUSC5Q8IXB3 177 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 LSM10Q969L4 123 aaKnown RBP10.19□□□□□ -0.78
C9orf3-203ENST00000375315 SFXN3Q9BWM7 321 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 RELNP78509 3460 aa10.19□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms