RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DUSP15Q9H1R2 295 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-204ENST00000375290 MEX3AA1L020 520 aaKnown RBP8.71□□□□□ -1.02
PTCH1-204ENST00000375290 EDN3P14138 238 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 FAM53AQ6NSI3 398 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-204ENST00000375290 OR5P3Q8WZ94 311 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 AHRRA9YTQ3 701 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 ZXDAP98168 799 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 DEFB108BQ8NET1 73 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 GNG10P50151 68 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ICAM4Q14773 271 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 WFDC8Q8IUA0 241 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 TUSC5Q8IXB3 177 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ZAR1Q86SH2 424 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 OR4D5Q8NGN0 318 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 MED19A0JLT2 244 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 CCL7P80098 99 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ADIPOQQ15848 244 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 CT83Q5H943 113 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 LHFPL1Q86WI0 220 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 IGKV1D-42A0A075B6H8 117 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 TMEM50AO95807 157 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 CA1P00915 261 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 MFAP4P55083 255 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 BATF2Q8N1L9 274 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 RPP21Q9H633 154 aaKnown RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 IGHV1OR15-9A0A0B4J2B8 117 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ONECUT1Q9UBC0 465 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ERVK11-1P61568 191 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 DCAF10Q5QP82 559 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 PRNTQ86SH4 94 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 MYO7AQ13402 2215 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 UMODP07911 640 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 TMPRSS3P57727 454 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 FAM214BQ7L5A3 538 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 OR1K1Q8NGR3 316 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF501Q96CX3 271 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-204ENST00000375290 OVOL2Q9BRP0 275 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 PHLDA3Q9Y5J5 127 aa8.7□□□□□ -1.02
PTCH1-204ENST00000375290 HEATR1Q9H583 2144 aaKnown RBP8.69□□□□□ -1.02
PTCH1-204ENST00000375290 SCTP09683 121 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 DERL1Q9BUN8 251 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 C1QTNF5Q9BXJ0 243 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 FTH1P19P0C7X4 201 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 TRBV23-1A0A0A0MS06 115 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 KRTCAP3Q53RY4 240 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 NRN1Q9NPD7 142 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PGPEP1LA6NFU8 196 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PAX1P15863 534 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 RND2P52198 227 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 GFRA4Q9GZZ7 299 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PPIAL4EA0A075B759 164 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PPIAL4DF5H284 164 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PPIAL4FP0DN26 164 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 PPIAL4AQ9Y536 164 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 IGLV3-32A0A0A0MS00 114 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 SHISA3A0PJX4 238 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 A0A1W2PRS3 328 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 HBDP02042 147 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 TMEM11P17152 192 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 CBLN1P23435 193 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF525Q8N782 197 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 ARPC1AQ92747 370 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 SGK494Q96LW2 274 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 CASP8AP2Q9UKL3 1982 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 FREM3P0C091 2139 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 F2Z2F3 143 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF205O95201 554 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 CRYBB3P26998 211 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 ASIPP42127 132 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
PTCH1-204ENST00000375290 FAM106CPP0CH98 169 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 YAE1D1Q9NRH1 226 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 PGPA6NDG6 321 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 MIC13Q5XKP0 118 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 OR9G1Q8NH87 305 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 ITGBL1O95965 494 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-204ENST00000375290 GDF9O60383 454 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 MGST2Q99735 147 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 LPAR2Q9HBW0 351 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 CALYQ9NYX4 217 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 H3BRM9 83 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 PEX7O00628 323 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 ANOS1P23352 680 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 IGFBP6P24592 240 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-204ENST00000375290 EGR4Q05215 589 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms