RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 RTL8BQ17RB0 113 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 NMSQ5H8A3 153 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 HIST2H2BDQ6DRA6 164 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 THOC7Q6I9Y2 204 aaKnown RBP8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 DHRS7BQ6IAN0 325 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 HCP5Q6MZN7 132 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 OR11H4Q8NGC9 324 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 OR4P4Q8NGL7 312 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 LINC01006Q8NI28 216 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 FAM110DQ8TAY7 271 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 THAP6Q8TBB0 222 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 SSMEM1Q8WWF3 244 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 R3HDM4Q96D70 268 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 NABP2Q9BQ15 211 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 AIFM2Q9BRQ8 373 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 MRPL20Q9BYC9 149 aaKnown RBP8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 SLC35D1Q9NTN3 355 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 DPM3Q9P2X0 92 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 POMT1Q9Y6A1 747 aa8.78□□□□□ -1
HLA-DQA1-202ENST00000374949 TRAV14DV4A0A0A6YYC5 116 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CENPVL3A0A0U1RRI6 287 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ODF3BA8MYP8 253 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 G3V3Q6 166 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RNASEK-C17orf49H0YIS7 233 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MPC2O95563 127 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 HRASP01112 189 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SLC25A4P12235 298 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NQO2P16083 231 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 G6PCP35575 357 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 REG1BP48304 166 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 UBE2E1P51965 193 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ARHGDIBP52566 201 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NKX2-5P52952 324 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LGALS4P56470 323 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ERVK-16P61578 105 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 KLRD1Q13241 179 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 DIAPH2-AS1Q14236 149 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SMCO1Q147U7 214 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LRRC37A5PQ49AS3 106 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TPTE2P1Q5T6R2 138 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 C11orf87Q6NUJ2 197 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 H2BFWTQ7Z2G1 175 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR5AN1Q8NGI8 311 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR4D5Q8NGN0 318 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR1S1Q8NH92 325 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LHX4Q969G2 390 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RPEQ96AT9 228 aa8.77□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IGHV1-3A0A0C4DH29 117 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A0G2JRQ6 117 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A0U1RQK1 487 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 HMSDA8MTL9 139 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OOSP1A8MZH6 123 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 H0YJW9 148 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 H7C2Y5 167 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ST8SIA3O43173 380 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CRYZL1O95825 349 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 P0C879 139 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PET100P0DJ07 73 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 BPIFB3P59826 476 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RAB32Q13637 225 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MINOS1Q5TGZ0 78 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TMEM65Q6PI78 240 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 Q6ZRM9 215 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MOB3BQ86TA1 216 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ZNF546Q86UE3 836 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PDZD9Q8IXQ8 264 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 DMBX1Q8NFW5 382 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FLYWCH2Q96CP2 140 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RNF126Q9BV68 326 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 COA4Q9NYJ1 87 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 WASHC3Q9Y3C0 194 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TBL2Q9Y4P3 447 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MINOS1-NBL1R4GNA1 71 aa8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TET2Q6N021 2002 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FXYD6-FXYD2A0A087WZ82 144 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IGHV1-69DA0A0B4J2H0 117 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A1W2PRD5 423 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A1W2PRF3 423 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 A0A1W2PRM7 423 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MARCH11A6NNE9 402 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 FAM90A9PA6NNJ1 464 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PITX3O75364 302 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 SCGB1D2O95969 90 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 IGHV1-69P01742 117 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 MBPP02686 304 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NKX2-1P43699 371 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RAB13P51153 203 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 S100A10P60903 97 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 ID3Q02535 119 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PRSS54Q6PEW0 395 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 Q6ZSV7 163 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OR4C13Q8NGP0 309 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 OSR1Q8TAX0 266 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 CACNG5Q9UF02 275 aa8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 LSM5Q9Y4Y9 91 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-202ENST00000374949 NBEAL2Q6ZNJ1 2754 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms